RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CATSPERBQ9H7T0 1116 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 LRRC40Q9H9A6 602 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 SLCO1B3Q9NPD5 702 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 OSER1Q9NX31 292 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 SEPT10Q9P0V9 454 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 KLHL14Q9P2G3 628 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 TLR6Q9Y2C9 796 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 PLLPQ9Y342 182 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 PCDHB5Q9Y5E4 795 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 MAD1L1Q9Y6D9 718 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 CAPN7Q9Y6W3 813 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 TTC3P53804 2025 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 SCN5AQ14524 2016 aa10.05□□□□□ -0.8
USP39-214ENST00000474572 MYO18AQ92614 2054 aaKnown RBP10.05□□□□□ -0.8
USP39-214ENST00000474572 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 ZCWPW2A0A1B0GU75 182 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 GOLGA8RI6L899 631 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 COPEO14579 308 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 HOXA2O43364 376 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 MAFKO60675 156 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 FKTNO75072 461 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 TADA2AO75478 443 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 USP1O94782 785 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 UBOX5O94941 541 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 TGDSO95455 350 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 EFEMP2O95967 443 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 IGLV3-27P01718 113 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 POLBP06746 335 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 CRHR1P34998 444 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 MAGEA12P43365 314 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 SERPINB4P48594 390 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 MLLT6P55198 1093 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 SESN2P58004 480 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 BNIP1Q12981 228 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 ARHGEF6Q15052 776 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 ARMC3Q5W041 872 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 CNTD1Q8N815 330 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 RTL3Q8N8U3 475 aaKnown RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 OR52K1Q8NGK4 314 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 SPPL2BQ8TCT7 592 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 PTPRN2Q92932 1015 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 CERS2Q96G23 380 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 FCRL2Q96LA5 508 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 PPP1R2P1Q96PQ5 205 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 FAM193BQ96PV7 902 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 FCRL5Q96RD9 977 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 SRPK1Q96SB4 655 aaKnown RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 ABI2Q9NYB9 513 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 CLIC5Q9NZA1 410 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 SFMBT1Q9UHJ3 866 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 PRG3Q9Y2Y8 225 aaPredicted RBP10.04□□□□□ -0.8
USP39-214ENST00000474572 HS3ST4Q9Y661 456 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 LTBP2Q14767 1821 aa10.04□□□□□ -0.8
USP39-214ENST00000474572 CHD5Q8TDI0 1954 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 FAM237BA0A1B0GVD1 139 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 MAGEB16A2A368 324 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 MTMR11A4FU01 709 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 CFAP73A6NFT4 308 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 E9PAM4 449 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 C2CD2LO14523 706 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 MATN3O15232 486 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 MSI1O43347 362 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 RTN3O95197 1032 aaPredicted RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 VNN2O95498 520 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 CXCL10P02778 98 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 ZDHHC11BP0C7U3 371 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SLC2A3P11169 496 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SLC11A1P49279 550 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 PSEN1P49768 467 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 NCALDP61601 193 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 USP46P62068 366 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 TNK2Q07912 1038 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SLC20A2Q08357 652 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 ELAVL2Q12926 359 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 GPR17Q13304 367 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 BMPR2Q13873 1038 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SEPT7Q16181 437 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 TCTN1Q2MV58 587 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 ACBD5Q5T8D3 534 aaPredicted RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 NAPEPLDQ6IQ20 393 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 TIGD7Q6NT04 549 aaPredicted RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 FUT10Q6P4F1 479 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 LINC00523Q86TU6 105 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 NPAS4Q8IUM7 802 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SCN4BQ8IWT1 228 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 TRIM42Q8IWZ5 723 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 FITM2Q8N6M3 262 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 C2orf15Q8WU43 125 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 SEPT8Q92599 483 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 NUP205Q92621 2012 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 RNF34Q969K3 372 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 CELF6Q96J87 481 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 CEP295NLQ96MC4 621 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 FCRL3Q96P31 734 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms