RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CIB1Q99828 191 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF341Q9BYN7 854 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 FEM1BQ9UK73 627 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 HTRA2O43464 458 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 PLA2G6O60733 806 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 ZBTB11O95625 1053 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 PIGRP01833 764 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 CHRNGP07510 517 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 MPSTP25325 297 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 TNFSF9P41273 254 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 ASPAP45381 313 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 GJA8P48165 433 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF143P52747 638 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 C21orf59P57076 290 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 FKBP1AP62942 108 aaKnown RBP19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 FAM102AQ5T9C2 384 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 MAMDC4Q6UXC1 1216 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 DDHD1Q8NEL9 900 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 PCDH19Q8TAB3 1148 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 TRPV6Q9H1D0 765 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF385DQ9H6B1 395 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 PIH1D1Q9NWS0 290 aaKnown RBP19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 USP21Q9UK80 565 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 FADS3Q9Y5Q0 445 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 THSD7AQ9UPZ6 1657 aa19.01■□□□□ 0.63
ECHDC1-214ENST00000474289 ZNF646O15015 1829 aaPredicted RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 G3V2L1 256 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 K7ERI5 159 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 PTGER2P43116 358 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 ORC1Q13415 861 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 TRNP1Q6NT89 227 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 SWSAP1Q6NVH7 229 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 XKR5Q6UX68 686 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 LYSMD3Q7Z3D4 306 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 TBC1D15Q8TC07 691 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 ATP6V0A1Q93050 837 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 TMEM143Q96AN5 459 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 ASB9Q96DX5 294 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 MCRS1Q96EZ8 462 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 MARK4Q96L34 752 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 ADPGKQ9BRR6 497 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 GPATCH1Q9BRR8 931 aaKnown RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 PDZD7Q9H5P4 517 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 EFCAB1Q9HAE3 211 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 SNX15Q9NRS6 342 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 ITGB1BP2Q9UKP3 347 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 SNX13Q9Y5W8 968 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 LRRIQ4A6NIV6 560 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 FAM155AB1AL88 458 aaPredicted RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 TMEM114B3SHH9 223 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 PRPSAP2O60256 369 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 TADA2AO75478 443 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 INHBBP09529 407 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 PROZP22891 400 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 PTK2BQ14289 1009 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 RFTN1Q14699 578 aaPredicted RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 CPSF7Q8N684 471 aaKnown RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 RNF169Q8NCN4 708 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 NPAS2Q99743 824 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 MAF1Q9H063 256 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 TSPYL2Q9H2G4 693 aaPredicted RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 ACSS2Q9NR19 701 aa19■□□□□ 0.63
ECHDC1-214ENST00000474289 C20orf96Q9NUD7 363 aaPredicted RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 DUS2Q9NX74 493 aaKnown RBP19■□□□□ 0.63
ECHDC1-214ENST00000474289 TRIM64CA6NLI5 447 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 C9IYK1 514 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 F5H423 210 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 H3BMQ9 156 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 TRIM38O00635 465 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 SLC22A2O15244 555 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 PRAMEP78395 509 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 PRKCEQ02156 737 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 MTERF2Q49AM1 385 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 WDR49Q8IV35 697 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 RDM1Q8NG50 284 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 COG8Q96MW5 612 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 PCDHAC1Q9H158 963 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 RPF2Q9H7B2 306 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 ZBTB26Q9HCK0 441 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 TRNAU1APQ9NX07 287 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 A0A087WXM4 84 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 HDAC3O15379 428 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 GCATO75600 419 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 LTFP02788 710 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 UGT1A6P19224 532 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 CD247P20963 164 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 UGT1A1P22309 533 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 UGT1A4P22310 534 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 UGT1A3P35503 534 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 UGT1A5P35504 534 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 RAP1GAPP47736 663 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 RPS6P62753 249 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 TRPC3Q13507 836 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 DGKZQ13574 1117 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 ATP1A4Q13733 1029 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 NHSL2Q5HYW2 709 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 SEL1L3Q68CR1 1132 aa18.99■□□□□ 0.63
ECHDC1-214ENST00000474289 MCF2L2Q86YR7 1114 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms