RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PSMD8P48556 350 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 MMP16P51512 607 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 VAMP7P51809 220 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 RAD23BP54727 409 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC8A3P57103 927 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 PCBP4P57723 403 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ST8SIA6P61647 398 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ADIGQ0VDE8 80 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 SFSWAPQ12872 951 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 PIK3R6Q5UE93 754 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 BROXQ5VW32 411 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ERICH6BQ5W0A0 696 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 BSPRYQ5W0U4 402 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 NAPEPLDQ6IQ20 393 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 MSANTD2Q6P1R3 559 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 KDM7AQ6ZMT4 941 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 MFN1Q8IWA4 741 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 DHX40Q8IX18 779 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 PARP9Q8IXQ6 854 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 TTC39CQ8N584 583 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ZNF557Q8N988 423 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 MFSD2AQ8NA29 543 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ANKRD52Q8NB46 1076 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 KDM1BQ8NB78 822 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 OR14C36Q8NHC7 312 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 FIBINQ8TAL6 211 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 SNRNP27Q8WVK2 155 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 EDEM1Q92611 657 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 TTC9Q92623 222 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 SEMA4DQ92854 862 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 FAM131CQ96AQ9 280 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 MYEOVQ96EZ4 313 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 NAF1Q96HR8 494 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 FAXDC2Q96IV6 333 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 HEXIM2Q96MH2 286 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 PRICKLE1Q96MT3 831 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ZNF578Q96N58 590 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 OMDQ99983 421 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 DNAI2Q9GZS0 605 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ZSCAN16Q9H4T2 348 aaPredicted RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 CPNE5Q9HCH3 593 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 PRDM9Q9NQV7 894 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 CISHQ9NSE2 258 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 EXOC1Q9NV70 894 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 ARHGAP20Q9P2F6 1191 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 DACH1Q9UI36 760 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 TSPAN16Q9UKR8 245 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 TPX2Q9ULW0 747 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 FRMD4BQ9Y2L6 1034 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 AHCTF1Q8WYP5 2266 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 PRRC2CQ9Y520 2896 aaKnown RBP5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 NOTCH2Q04721 2471 aa5.32□□□□□ -1.56
SNRNP40-204ENST00000474025 USP9YO00507 2555 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 USP9XQ93008 2570 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 MYO9AB2RTY4 2548 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 SPTAN1Q13813 2472 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 EDDM13A0A1B0GTR0 161 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 GOLGA6L7A0A1B0GV03 622 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 TARSL2A2RTX5 802 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 ENO4A6NNW6 628 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 TTC34A8MYJ7 566 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 ACSL4O60488 711 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 SDC3O75056 442 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 MT-CO3P00414 261 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 MPOP05164 745 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 SRPRAP08240 638 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 C6P13671 934 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 C5AR1P21730 350 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 NR2F2P24468 414 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 MZF1P28698 734 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 DRD3P35462 400 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC11A2P49281 568 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 METAP1P53582 386 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 DAOAP59103 153 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 ERVPABLB-1P60509 514 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 RPS24P62847 133 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 GABREP78334 506 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 E2F1Q01094 437 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 ENPEPQ07075 957 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 BST2Q10589 180 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 OVGP1Q12889 678 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 ZNF211Q13398 564 aaPredicted RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 LY6DQ14210 128 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 NFIL3Q16649 462 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 GOLGA7BQ2TAP0 167 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 SLC45A4Q5BKX6 768 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 FSCBQ5H9T9 825 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 PITRM1Q5JRX3 1037 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 ARHGAP40Q5TG30 622 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 CDCP2Q5VXM1 449 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 RESP18Q5W5W9 173 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 NUGGCQ68CJ6 796 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 NADSYN1Q6IA69 706 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 XKR5Q6UX68 686 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 MMS22LQ6ZRQ5 1243 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 INTS8Q75QN2 995 aaKnown RBP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 SND1Q7KZF4 910 aaKnown RBP eCLIP5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 IQCHQ86VS3 1027 aa5.31□□□□□ -1.56
SNRNP40-204ENST00000474025 UNC45BQ8IWX7 931 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms