RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DAPK3O43293 454 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 CREB3O43889 395 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 RPP40O75818 363 aaKnown RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 LRIG2O94898 1065 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 TMEM253P0C7T8 217 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 RHOQP17081 205 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 MZF1P28698 734 aaPredicted RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 EPHB2P29323 1055 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 MIPP30301 263 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 CDC25BP30305 580 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 PCK1P35558 622 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 ETFBP38117 255 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 PLK1P53350 603 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 SIM2Q14190 667 aaPredicted RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 HADHQ16836 314 aaKnown RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 CXorf57Q6NSI4 855 aaKnown RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 PRR23BQ6ZRT6 265 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 TMTC1Q8IUR5 882 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 ZNF683Q8IZ20 524 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 KDM1BQ8NB78 822 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 ERLEC1Q96DZ1 483 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 LMLNQ96KR4 655 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 SPACA7Q96KW9 195 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 FEM1AQ9BSK4 669 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 SPON2Q9BUD6 331 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 C2orf49Q9BVC5 232 aaPredicted RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 TPSD1Q9BZJ3 242 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 TRIM7Q9C029 511 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 DHX35Q9H5Z1 703 aaKnown RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 IMPACTQ9P2X3 320 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 INTS6Q9UL03 887 aaKnown RBP14.13□□□□□ -0.15
USF1-205ENST00000473969 USP18Q9UMW8 372 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 AP4E1Q9UPM8 1137 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 ERVW-1Q9UQF0 538 aa14.13□□□□□ -0.15
USF1-205ENST00000473969 MUC6Q6W4X9 2439 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 A0A1W2PQF6 199 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 ILVBLA1L0T0 632 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 PROB1E7EW31 1015 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 RNASEH1O60930 286 aaKnown RBP14.12□□□□□ -0.15
USF1-205ENST00000473969 LILRB5O75023 590 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 LMNAP02545 664 aaKnown RBP14.12□□□□□ -0.15
USF1-205ENST00000473969 CHRM1P11229 460 aaPredicted RBP14.12□□□□□ -0.15
USF1-205ENST00000473969 ACADMP11310 421 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 HLA-EP13747 358 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 HTR7P34969 479 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 MAPKAPK2P49137 400 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 IRAK1P51617 712 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 TPI1P60174 286 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 ENPP2Q13822 863 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 ACCSLQ4AC99 568 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 KIAA1324Q6UXG2 1013 aaKnown RBP14.12□□□□□ -0.15
USF1-205ENST00000473969 ZNF783Q6ZMS7 281 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.12□□□□□ -0.15
USF1-205ENST00000473969 C11orf74Q86VG3 221 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 RASSF3Q86WH2 238 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 PSTKQ8IV42 348 aaKnown RBP14.12□□□□□ -0.15
USF1-205ENST00000473969 RHOT2Q8IXI1 618 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 SPC24Q8NBT2 197 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 MDGA1Q8NFP4 955 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 GAB3Q8WWW8 586 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 ARHGEF26Q96DR7 871 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 FBRSQ9HAH7 460 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 INTUQ9ULD6 942 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 HPCAL4Q9UM19 191 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 NENFQ9UMX5 172 aa14.12□□□□□ -0.15
USF1-205ENST00000473969 FAM72CH0Y354 149 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 EEF2KO00418 725 aaKnown RBP14.11□□□□□ -0.15
USF1-205ENST00000473969 FGF10O15520 208 aaPredicted RBP14.11□□□□□ -0.15
USF1-205ENST00000473969 MAP3K13O43283 966 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 HRO43593 1189 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 ZNF217O75362 1048 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 LRCH4O75427 683 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 PRKCHP24723 683 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 MAGEA1P43355 309 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 NUMBP49757 651 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 ZNF135P52742 658 aaPredicted RBP14.11□□□□□ -0.15
USF1-205ENST00000473969 ZNF252P-AS1Q0IIN9 211 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 PTPRNQ16849 979 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 FAM72AQ5TYM5 149 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 IL31Q6EBC2 164 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 FAM72DQ6L9T8 149 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 KIAA1211LQ6NV74 962 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 FAM72BQ86X60 149 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 ZNF354CQ86Y25 554 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 PYROXD2Q8N2H3 581 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 NIPA2Q8N8Q9 360 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 PRCCQ92733 491 aaPredicted RBP14.11□□□□□ -0.15
USF1-205ENST00000473969 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 RPL10LQ96L21 214 aaKnown RBP14.11□□□□□ -0.15
USF1-205ENST00000473969 HINFPQ9BQA5 517 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 SNRNP25Q9BV90 132 aaKnown RBP14.11□□□□□ -0.15
USF1-205ENST00000473969 PACSIN1Q9BY11 444 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 EPC1Q9H2F5 836 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 TMEM245Q9H330 911 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 ZWILCHQ9H900 591 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 PRDM16Q9HAZ2 1276 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 TMEM248Q9NWD8 314 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 GPATCH2LQ9NWQ4 482 aa14.11□□□□□ -0.15
USF1-205ENST00000473969 DNAI1Q9UI46 699 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms