RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 LACTBL1A8MY62 500 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 MATN2O00339 956 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ZNF195O14628 629 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 AIM2O14862 343 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 NPHS1O60500 1241 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 UGT1A9O60656 530 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 KRT34O76011 436 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CAPNS1P04632 268 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 SMIM18P0DKX4 95 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ZNF23P17027 643 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 MGAT1P26572 445 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 SESN2P58004 480 aaPredicted RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 COG7P83436 770 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 TMEM132BQ14DG7 1078 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 PSMD5Q16401 504 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 PIGGQ5H8A4 983 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 JADE1Q6IE81 842 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 KLHDC10Q6PID8 442 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 LRRC52Q8N7C0 313 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 GOLM1Q8NBJ4 401 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 HIPK4Q8NE63 616 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 JDP2Q8WYK2 163 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 EME1Q96AY2 570 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ASB9Q96DX5 294 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ZNF778Q96MU6 729 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 LBHD1Q9BQE6 289 aaPredicted RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 C20orf27Q9GZN8 174 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CCDC68Q9H2F9 335 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 WDR41Q9HAD4 459 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 UGT1A7Q9HAW7 530 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 UGT1A10Q9HAW8 530 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 UGT1A8Q9HAW9 530 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 OXSMQ9NWU1 459 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 GALNT8Q9NY28 637 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 DPP3Q9NY33 737 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CLIC5Q9NZA1 410 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 TMEM216Q9P0N5 145 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ZNF112Q9UJU3 913 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 FAF1Q9UNN5 650 aaPredicted RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 MYRFQ9Y2G1 1151 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 TELO2Q9Y4R8 837 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 E9PBE3 544 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 RNF103O00237 685 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 KLHL41O60662 606 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 TRMUO75648 421 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 GSRP00390 522 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 C7P10643 843 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 EDNRBP24530 442 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PSMD8P48556 350 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CDH8P55286 799 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CDC42EP1Q00587 391 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 MPP3Q13368 585 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 SLC12A1Q13621 1099 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 APOFQ13790 326 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 TLR1Q15399 786 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 NAPEPLDQ6IQ20 393 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PRMT9Q6P2P2 845 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 DPH6Q7L8W6 267 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 STRA8Q7Z7C7 330 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 APOBEC3FQ8IUX4 373 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 DCLK2Q8N568 766 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 KLHL23Q8NBE8 558 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CEP70Q8NHQ1 597 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 URGCPQ8TCY9 931 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 DIS3LQ8TF46 1054 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 LENG8Q96PV6 779 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 CDRT15Q96T59 188 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CCT7Q99832 543 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 UBE2OQ9C0C9 1292 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 PLAC1Q9HBJ0 212 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PLGRKTQ9HBL7 147 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 TJP2Q9UDY2 1190 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 SLC8A2Q9UPR5 921 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 GNEQ9Y223 722 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 COL1A2P08123 1366 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 LOC285556D6RIA3 1793 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PRSS51A0A1B0GVH4 220 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 NOL3O60936 208 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 FBXO21O94952 628 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 TFAP2AP05549 437 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 NFICP08651 508 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CDK9P50750 372 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 ADARP55265 1226 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZNF280AP59817 542 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 TXNL4AP83876 142 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 MBTD1Q05BQ5 628 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PTK2BQ14289 1009 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZNF423Q2M1K9 1284 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 NADK2Q4G0N4 442 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ACBD5Q5T8D3 534 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 RWDD4Q6NW29 188 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 PIWIL4Q7Z3Z4 852 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 TICAM1Q8IUC6 712 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 RIOX2Q8IUF8 465 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 BEST2Q8NFU1 509 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 TSPAN14Q8NG11 270 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZNF669Q96BR6 464 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 DUS3LQ96G46 650 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 CNBD2Q96M20 576 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 SLC9A7Q96T83 725 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms