RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 MPP7Q5T2T1 576 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 TCERG1LQ5VWI1 586 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 RNF219Q5W0B1 726 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 NUGGCQ68CJ6 796 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 ARHGAP17Q68EM7 881 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 ATL3Q6DD88 541 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 NCEH1Q6PIU2 408 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 DHX40Q8IX18 779 aaKnown RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 EID2Q8N6I1 236 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 MNS1Q8NEH6 495 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 NDRG1Q92597 394 aaKnown RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 FCRL3Q96P31 734 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 DDX50Q9BQ39 737 aaKnown RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 RSPH9Q9H1X1 276 aaPredicted RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 PABPC3Q9H361 631 aaKnown RBP7.18□□□□□ -1.26
CKS1B-205ENST00000473344 STIM2Q9P246 746 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 STOML2Q9UJZ1 356 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 ATP6V1DQ9Y5K8 247 aa7.18□□□□□ -1.26
CKS1B-205ENST00000473344 CACNA1EQ15878 2313 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 A0A1B0GVL5 298 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 J3QL48 77 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 CBX4O00257 560 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 MID1O15344 667 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 MSI1O43347 362 aaKnown RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 ATP8B1O43520 1251 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SIN3BO75182 1162 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 MOCS3O95396 460 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 F13A1P00488 732 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 PRB1P04280 392 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 TPM1P09493 284 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SETSIPP0DME0 302 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 EPB41P11171 864 aaKnown RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 PFKFB1P16118 471 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 ITPKBP27987 946 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SLC8A1P32418 973 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 NNMTP40261 264 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SGSHP51688 502 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 YWHAEP62258 255 aaKnown RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 HNRNPA1L2Q32P51 320 aaKnown RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 DCAF17Q5H9S7 520 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 HES3Q5TGS1 186 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 PIK3R6Q5UE93 754 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 RFWD3Q6PCD5 774 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SND1Q7KZF4 910 aaKnown RBP eCLIP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 KIAA0907Q7Z7F0 614 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 ZNF605Q86T29 641 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 MMAAQ8IVH4 418 aaKnown RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 CARNMT1Q8N4J0 409 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 OXR1Q8N573 874 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 HJURPQ8NCD3 748 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 OR2T34Q8NGX1 318 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 OR14C36Q8NHC7 312 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 UBA3Q8TBC4 463 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 ADAM32Q8TC27 787 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SAP25Q8TEE9 199 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SEMA4DQ92854 862 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 SERAC1Q96JX3 654 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 NRSN2Q9GZP1 204 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 NEUROG2Q9H2A3 272 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 MTG2Q9H4K7 406 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 CNGB3Q9NQW8 809 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 ARGLU1Q9NWB6 273 aaPredicted RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 KIAA1257Q9ULG3 409 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 FZD4Q9ULV1 537 aa7.17□□□□□ -1.26
CKS1B-205ENST00000473344 TPX2Q9ULW0 747 aaKnown RBP7.17□□□□□ -1.26
CKS1B-205ENST00000473344 PCNX2A6NKB5 2137 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3DA0A087WVF3 549 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3IA0A087WXS9 549 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3EA0A087X179 549 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3KA0A087X1G2 549 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 EDDM13A0A1B0GTR0 161 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 GOLGA6L7A0A1B0GV03 622 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TARSL2A2RTX5 802 aaKnown RBP7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3FA6NER0 549 aaPredicted RBP7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3LB9A6J9 549 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TLR4O00206 839 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 PIK3R2O00459 728 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 CETN3O15182 167 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
CKS1B-205ENST00000473344 ACSL4O60488 711 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 MAGEC1O60732 1142 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 RHOBTB3O94955 611 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 IL1BP01584 269 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 SRPRAP08240 638 aaKnown RBP7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBC1D3HP0C7X1 549 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 VDRP11473 427 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 SNRPBP14678 240 aaKnown RBP7.16□□□□□ -1.26
CKS1B-205ENST00000473344 CMA1P23946 247 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 EPHA8P29322 1005 aaPredicted RBP7.16□□□□□ -1.26
CKS1B-205ENST00000473344 ACTN2P35609 894 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 CSKP41240 450 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 SYKP43405 635 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 PSMD8P48556 350 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 ACADVLP49748 655 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 CLDN6P56747 220 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 TBX4P57082 545 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 DAOAP59103 153 aa7.16□□□□□ -1.26
CKS1B-205ENST00000473344 ECT2LQ008S8 904 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms