RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 APCDD1Q8J025 514 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 DCBLD1Q8N8Z6 715 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 FIBINQ8TAL6 211 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 PTPRN2Q92932 1015 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 IMPG2Q9BZV3 1241 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 FBRSQ9HAH7 460 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 RAB20Q9NX57 234 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 FAM13BQ9NYF5 915 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 STIM2Q9P246 746 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 XPO7Q9UIA9 1087 aaKnown RBP9.67□□□□□ -0.86
VCL-204ENST00000472585 RABGEF1Q9UJ41 708 aa9.67□□□□□ -0.86
VCL-204ENST00000472585 SPTAN1Q13813 2472 aaKnown RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 K7ELQ4 463 aaPredicted RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 TLR4O00206 839 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 O00370 1275 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 TRIM38O00635 465 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 CALUO43852 315 aaPredicted RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 ACSL4O60488 711 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 RNASEH2AO75792 299 aaKnown RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 RHOBTB3O94955 611 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 LATS1O95835 1130 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 F13A1P00488 732 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 MPOP05164 745 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 ATP5BP06576 529 aaKnown RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 ZSCAN22P10073 491 aaPredicted RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 KRT10P13645 584 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 LCP1P13796 627 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 PFKFB1P16118 471 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 SLC8A1P32418 973 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 DRD3P35462 400 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 RGS7P49802 495 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 CCR5P51681 352 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 ERVPABLB-1P60509 514 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 GABREP78334 506 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 SFSWAPQ12872 951 aaKnown RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 DPYDQ12882 1025 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 NFATC3Q12968 1075 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 ARID5BQ14865 1188 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 CST6Q15828 149 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 MPP7Q5T2T1 576 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 MSANTD2Q6P1R3 559 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 CEP57L1Q8IYX8 460 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 CFAP52Q8N1V2 620 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 STK40Q8N2I9 435 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 SLC25A45Q8N413 288 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 OXR1Q8N573 874 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 OR2T34Q8NGX1 318 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 SLC35F5Q8WV83 523 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 KCTD13Q8WZ19 329 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 RFFLQ8WZ73 363 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 GOLGA1Q92805 767 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 FAM131CQ96AQ9 280 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 HIC2Q96JB3 615 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 FCRL2Q96LA5 508 aaPredicted RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 NUCKS1Q9H1E3 243 aaKnown RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 ABCC13Q9NSE7 274 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 OLA1Q9NTK5 396 aaKnown RBP9.66□□□□□ -0.86
VCL-204ENST00000472585 SARDHQ9UL12 918 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 ERVW-1Q9UQF0 538 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 CA5BQ9Y2D0 317 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 MYO9AB2RTY4 2548 aa9.66□□□□□ -0.86
VCL-204ENST00000472585 LRRC72A6NJI9 287 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 RNF103O00237 685 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 LATO43561 262 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 GIMD1P0DJR0 217 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 TRIM21P19474 475 aaKnown RBP9.65□□□□□ -0.86
VCL-204ENST00000472585 ACP1P24666 158 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 GTF2H1P32780 548 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 RXRGP48443 463 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 STK19P49842 368 aaPredicted RBP9.65□□□□□ -0.86
VCL-204ENST00000472585 ADPRHP54922 357 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 DAB2P98082 770 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 ENPEPQ07075 957 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 SGO2Q562F6 1265 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 PITRM1Q5JRX3 1037 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 KIAA1614Q5VZ46 1190 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 PACS2Q86VP3 889 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 MFN1Q8IWA4 741 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 SMYD4Q8IYR2 804 aaPredicted RBP9.65□□□□□ -0.86
VCL-204ENST00000472585 SCML4Q8N228 414 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 RNF139Q8WU17 664 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 SNRNP27Q8WVK2 155 aaKnown RBP9.65□□□□□ -0.86
VCL-204ENST00000472585 KAT5Q92993 513 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 AZIN2Q96A70 460 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 SLC39A13Q96H72 371 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 FAXDC2Q96IV6 333 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 SERAC1Q96JX3 654 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 RPL10LQ96L21 214 aaKnown RBP9.65□□□□□ -0.86
VCL-204ENST00000472585 LRRC4Q9HBW1 653 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 THSD1Q9NS62 852 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 KIAA1468Q9P260 1216 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 PCDHB1Q9Y5F3 818 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 BOD1L1Q8NFC6 3051 aa9.65□□□□□ -0.86
VCL-204ENST00000472585 TDRD6O60522 2096 aaKnown RBP9.65□□□□□ -0.87
VCL-204ENST00000472585 LRRK2Q5S007 2527 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms