RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SLC7A4O43246 635 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 RTN2O75298 545 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 TRIM49P0CI25 452 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 TRIM49CP0CI26 452 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 RBMS1P29558 406 aaKnown RBP19.66■□□□□ 0.74
SORT1-203ENST00000471996 RPS24P62847 133 aaKnown RBP19.66■□□□□ 0.74
SORT1-203ENST00000471996 NFATC3Q12968 1075 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 CUL4AQ13619 759 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 CDH18Q13634 790 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 ISXQ2M1V0 245 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 RNF219Q5W0B1 726 aaPredicted RBP19.66■□□□□ 0.74
SORT1-203ENST00000471996 CCDC117Q8IWD4 279 aaPredicted RBP19.66■□□□□ 0.74
SORT1-203ENST00000471996 TATDN2Q93075 761 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 MYEOVQ96EZ4 313 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 FAXDC2Q96IV6 333 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 APOLD1Q96LR9 279 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 OSBPL2Q9H1P3 480 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 SATB2Q9UPW6 733 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 CA5BQ9Y2D0 317 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 CEP83Q9Y592 693 aa19.66■□□□□ 0.74
SORT1-203ENST00000471996 MOCS3O95396 460 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 MYF5P13349 255 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 AFMP43652 599 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 METAP1P53582 386 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 GOLGA7BQ2TAP0 167 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 SETMARQ53H47 684 aaPredicted RBP19.65■□□□□ 0.74
SORT1-203ENST00000471996 COLEC12Q5KU26 742 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 CCDC81Q6ZN84 652 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 SIX6OS1Q8N1H7 587 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 EXD3Q8N9H8 876 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 RPL10LQ96L21 214 aaKnown RBP19.65■□□□□ 0.74
SORT1-203ENST00000471996 DDX50Q9BQ39 737 aaKnown RBP19.65■□□□□ 0.74
SORT1-203ENST00000471996 USP29Q9HBJ7 922 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 TJP2Q9UDY2 1190 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 TSPAN16Q9UKR8 245 aa19.65■□□□□ 0.74
SORT1-203ENST00000471996 LY6G6EA0A0G2JKS1 128 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 A0A1W2PNU3 283 aaPredicted RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 TERTO14746 1132 aaKnown RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 KLRC4O43908 158 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 CUTAO60888 179 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 RNGTTO60942 597 aaKnown RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 PIAS2O75928 621 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 NEFLP07196 543 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 THEGLP0DJG4 465 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 ALPPL2P10696 532 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 PDIA4P13667 645 aaKnown RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 DUSP3P51452 185 aaPredicted RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 TBX4P57082 545 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 DAOAP59103 153 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 BST2Q10589 180 aaKnown RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 KCNMA1Q12791 1236 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 POM121L1PQ3SYA9 428 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 C3orf38Q5JPI3 329 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 INTS8Q75QN2 995 aaKnown RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 SCML4Q8N228 414 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 TMEM145Q8NBT3 493 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 MAPK15Q8TD08 544 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 KCTD13Q8WZ19 329 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 GRAMD1AQ96CP6 724 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 SPAG5Q96R06 1193 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 ZSCAN16Q9H4T2 348 aaPredicted RBP19.64■□□□□ 0.73
SORT1-203ENST00000471996 MMRN2Q9H8L6 949 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 TMEM8AQ9HCN3 771 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 CNGB3Q9NQW8 809 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 NLGN3Q9NZ94 848 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 MTMR6Q9Y217 621 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 U3KQA8 63 aa19.64■□□□□ 0.73
SORT1-203ENST00000471996 PIEZO2Q9H5I5 2752 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 PTPN13Q12923 2485 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 LUC7L3O95232 432 aaKnown RBP19.63■□□□□ 0.73
SORT1-203ENST00000471996 VAV1P15498 845 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 STK19P49842 368 aaPredicted RBP19.63■□□□□ 0.73
SORT1-203ENST00000471996 ENPEPQ07075 957 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 ARL13BQ3SXY8 428 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 SGO2Q562F6 1265 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 MS4A13Q5J8X5 152 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 APCDD1Q8J025 514 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 CFAP52Q8N1V2 620 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 PRR11Q96HE9 360 aaPredicted RBP19.63■□□□□ 0.73
SORT1-203ENST00000471996 EVA1BQ9NVM1 165 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 HESX1Q9UBX0 185 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 PCDHGA8Q9Y5G5 932 aa19.63■□□□□ 0.73
SORT1-203ENST00000471996 NNMTP40261 264 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 DCAF6Q58WW2 860 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 AGBL4Q5VU57 503 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 FAM46CQ5VWP2 391 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 GRAMD1CQ8IYS0 662 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 IFI44Q8TCB0 444 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 SEMA4DQ92854 862 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 NUCKS1Q9H1E3 243 aaKnown RBP19.62■□□□□ 0.73
SORT1-203ENST00000471996 CAAP1Q9H8G2 361 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 EXOC1Q9NV70 894 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 SARDHQ9UL12 918 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 TRAF3IP3Q9Y228 551 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 COL12A1Q99715 3063 aa19.62■□□□□ 0.73
SORT1-203ENST00000471996 BSNQ9UPA5 3926 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 NEMP2A6NFY4 417 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 CDRT15L2A8MXV6 281 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 SCAMP1O15126 338 aa19.61■□□□□ 0.73
SORT1-203ENST00000471996 CALUO43852 315 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms