RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SNAP91O60641 907 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 RTN2O75298 545 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 PAGE1O75459 146 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 RNASEH2AO75792 299 aaKnown RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 GNA14O95837 355 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SYPP08247 313 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 GLDCP23378 1020 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SLC8A1P32418 973 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 MTIF2P46199 727 aaKnown RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 PSMD8P48556 350 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 PPP2CBP62714 309 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 PPP2CAP67775 309 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 ECT2LQ008S8 904 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 CETN1Q12798 172 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 NME3Q13232 169 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 STILQ15468 1287 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 CST6Q15828 149 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 EXOC3L4Q17RC7 722 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 ALFQ53S48 1182 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 MPP7Q5T2T1 576 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 OLFML1Q6UWY5 402 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 GBP6Q6ZN66 633 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 GATAD2AQ86YP4 633 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 FAM71AQ8IYT1 594 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 ZNF683Q8IZ20 524 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 BAHD1Q8TBE0 780 aaPredicted RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 GANCQ8TET4 914 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SLC20A1Q8WUM9 679 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SERPINB11Q96P15 392 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 NAA15Q9BXJ9 866 aaKnown RBP8.34□□□□□ -1.07
USP48-207ENST00000471752 SIK2Q9H0K1 926 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 CLSTN2Q9H4D0 955 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SLC32A1Q9H598 525 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 THAP9Q9H5L6 903 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 POPDC2Q9HBU9 364 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 TM7SF3Q9NS93 570 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 PIGVQ9NUD9 493 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 DDIT4Q9NX09 232 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 APEX2Q9UBZ4 518 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 SUN2Q9UH99 717 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 VANGL2Q9ULK5 521 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 OR51B4Q9Y5P0 310 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 FHOD1Q9Y613 1164 aa8.34□□□□□ -1.07
USP48-207ENST00000471752 A0A0D9SEW6 157 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 FAM221BA6H8Z2 402 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 DNTTP04053 509 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 ATP5BP06576 529 aaKnown RBP8.33□□□□□ -1.08
USP48-207ENST00000471752 CTSLP07711 333 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 GNSP15586 552 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 CHRNB2P17787 502 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 DRD3P35462 400 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 CTSKP43235 329 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 ACADSBP45954 432 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 UBE2HP62256 183 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 SLC6A3Q01959 620 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 BNIP3Q12983 259 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 CDH18Q13634 790 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 DRAP1Q14919 205 aaPredicted RBP8.33□□□□□ -1.08
USP48-207ENST00000471752 VWA3BQ502W6 1294 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 CCDC157Q569K6 752 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 KLHDC7AQ5VTJ3 777 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 ZNF776Q68DI1 518 aaPredicted RBP8.33□□□□□ -1.08
USP48-207ENST00000471752 C19orf48Q6RUI8 117 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 KDM7AQ6ZMT4 941 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 BEND5Q7L4P6 421 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 NOP9Q86U38 636 aaKnown RBP8.33□□□□□ -1.08
USP48-207ENST00000471752 NETO2Q8NC67 525 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 RHBDD1Q8TEB9 315 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 GOLGA1Q92805 767 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 KLK6Q92876 244 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 VOPP1Q96AW1 172 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 TBCBQ99426 244 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 PSMB7Q99436 277 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 FEM1AQ9BSK4 669 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 BTBD1Q9H0C5 482 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 NDST4Q9H3R1 872 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 FAM204AQ9H8W3 233 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 MPP6Q9NZW5 540 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 KIAA1522Q9P206 1035 aaPredicted RBP8.33□□□□□ -1.08
USP48-207ENST00000471752 BAHCC1Q9P281 2608 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 ARHGAP20Q9P2F6 1191 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 PCDHGC3Q9UN70 934 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 MSRB2Q9Y3D2 182 aa8.33□□□□□ -1.08
USP48-207ENST00000471752 ACACAQ13085 2346 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 A0A1W2PR77 199 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 M0QYT0 321 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 BNIP3LO60238 219 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 ZNF821O75541 412 aaPredicted RBP8.32□□□□□ -1.08
USP48-207ENST00000471752 ENDOD1O94919 500 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 CD27P26842 260 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 MAT2AP31153 395 aaKnown RBP8.32□□□□□ -1.08
USP48-207ENST00000471752 FLT3P36888 993 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 PPP1R2P41236 205 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 MATKP42679 507 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 TAS2R38P59533 333 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 CDK17Q00537 523 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 SCAPQ12770 1279 aa8.32□□□□□ -1.08
USP48-207ENST00000471752 CNTN1Q12860 1018 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms