RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 FANCMQ8IYD8 2048 aa15.72■□□□□ 0.11
SDC3-203ENST00000471567 TCRBV21S2A2A0A5A6 115 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 ILVBLA1L0T0 632 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 WASH3PC4AMC7 463 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 FAM72CH0Y354 149 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 LRCH4O75427 683 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 LCA5LO95447 670 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 RHOCP08134 193 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 RHOQP17081 205 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 MZF1P28698 734 aaPredicted RBP15.71■□□□□ 0.11
SDC3-203ENST00000471567 OR1E1P30953 314 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 HOXC13P31276 330 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 VASPP50552 380 aaPredicted RBP15.71■□□□□ 0.11
SDC3-203ENST00000471567 ST8SIA6P61647 398 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 ECT2LQ008S8 904 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 SEMA3BQ13214 749 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 FNDC3BQ53EP0 1204 aaKnown RBP15.71■□□□□ 0.11
SDC3-203ENST00000471567 ERMARDQ5T6L9 678 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 FAM72AQ5TYM5 149 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 RNF219Q5W0B1 726 aaPredicted RBP15.71■□□□□ 0.11
SDC3-203ENST00000471567 ANO7Q6IWH7 933 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 FAM72DQ6L9T8 149 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 FAM72BQ86X60 149 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 TMTC1Q8IUR5 882 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 EPAS1Q99814 870 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 MAGEB5Q9BZ81 275 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 SUN2Q9UH99 717 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 USP18Q9UMW8 372 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 ERVW-1Q9UQF0 538 aa15.71■□□□□ 0.11
SDC3-203ENST00000471567 WDFY4Q6ZS81 3184 aa15.71■□□□□ 0.1
SDC3-203ENST00000471567 SYNCRIPO60506 623 aaKnown RBP15.7■□□□□ 0.1
SDC3-203ENST00000471567 PRKCHP24723 683 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 CYLC1P35663 651 aaPredicted RBP15.7■□□□□ 0.1
SDC3-203ENST00000471567 PXNP49023 591 aaPredicted RBP15.7■□□□□ 0.1
SDC3-203ENST00000471567 MAPKAPK2P49137 400 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 ZNF135P52742 658 aaPredicted RBP15.7■□□□□ 0.1
SDC3-203ENST00000471567 BOLA3Q53S33 107 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 KIAA1211LQ6NV74 962 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 RWDD4Q6NW29 188 aaKnown RBP15.7■□□□□ 0.1
SDC3-203ENST00000471567 TFAP2DQ7Z6R9 452 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 NLRP14Q86W24 1093 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 RHOT2Q8IXI1 618 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 PYROXD2Q8N2H3 581 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 MDGA1Q8NFP4 955 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 OR52K2Q8NGK3 314 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 FAM122AQ96E09 287 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 MRGPRX3Q96LB0 322 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 PEBP4Q96S96 227 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 MUC3BQ9H195 1237 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 TMEM248Q9NWD8 314 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 PCSK1NQ9UHG2 260 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 VPS28Q9UK41 221 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 AP4E1Q9UPM8 1137 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 NEU3Q9UQ49 428 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 RAD54BQ9Y620 910 aa15.7■□□□□ 0.1
SDC3-203ENST00000471567 DOCK4Q8N1I0 1966 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 WASH4PA8MWX3 477 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 GOLGA6L6A8MZA4 724 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 HRO43593 1189 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 EPHX1P07099 455 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 GABRG2P18507 467 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 EPHB2P29323 1055 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 ETFBP38117 255 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 PLA2G5P39877 138 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 NNMTP40261 264 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 KRT83P78385 493 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 CAMK2GQ13555 558 aaPredicted RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 TCEAL1Q15170 157 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 USP39Q53GS9 565 aaKnown RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 CYP4V2Q6ZWL3 525 aaPredicted RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 HMGB4Q8WW32 186 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 GAB3Q8WWW8 586 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 NKD2Q969F2 451 aaPredicted RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 MYO19Q96H55 970 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 BTBD6Q96KE9 485 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 SNRNP25Q9BV90 132 aaKnown RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 C2orf49Q9BVC5 232 aaPredicted RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 EPC1Q9H2F5 836 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 DHX35Q9H5Z1 703 aaKnown RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 CATSPERBQ9H7T0 1116 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 FBRSQ9HAH7 460 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 LUC7LQ9NQ29 371 aaKnown RBP15.69■□□□□ 0.1
SDC3-203ENST00000471567 DONSONQ9NYP3 566 aa15.69■□□□□ 0.1
SDC3-203ENST00000471567 BCCIPQ9P287 314 aaKnown RBP eCLIP15.69■□□□□ 0.1
SDC3-203ENST00000471567 FGF10O15520 208 aaPredicted RBP15.68■□□□□ 0.1
SDC3-203ENST00000471567 CREB3O43889 395 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 MTA2O94776 668 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 PROSCO94903 275 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 C7P10643 843 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 CTSOP43234 321 aaPredicted RBP15.68■□□□□ 0.1
SDC3-203ENST00000471567 MAGEA1P43355 309 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 GNA12Q03113 381 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 BYSLQ13895 437 aaKnown RBP15.68■□□□□ 0.1
SDC3-203ENST00000471567 SPA17Q15506 151 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 HADHQ16836 314 aaKnown RBP15.68■□□□□ 0.1
SDC3-203ENST00000471567 HNRNPA1L2Q32P51 320 aaKnown RBP15.68■□□□□ 0.1
SDC3-203ENST00000471567 C11orf74Q86VG3 221 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 PGBD3Q8N328 593 aa15.68■□□□□ 0.1
SDC3-203ENST00000471567 RTL3Q8N8U3 475 aaKnown RBP15.68■□□□□ 0.1
SDC3-203ENST00000471567 DCAF4L2Q8NA75 395 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms