RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 MAGEC1O60732 1142 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 TBL1XO60907 577 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 FBXO21O94952 628 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 LDOC1O95751 146 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-211ENST00000471455 NUDT1P36639 197 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 CCR5P51681 352 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 KRT85P78386 507 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 IL9RQ01113 521 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 C19orf57Q0VDD7 668 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 ILKQ13418 452 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 CUL2Q13617 745 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 STILQ15468 1287 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 HNRNPA1L2Q32P51 320 aaKnown RBP9.46□□□□□ -0.9
CPSF4-211ENST00000471455 DCAF17Q5H9S7 520 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-211ENST00000471455 PIK3R6Q5UE93 754 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 TCERG1LQ5VWI1 586 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 SEMA4DQ92854 862 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 TTC17Q96AE7 1141 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 CNDP2Q96KP4 475 aaKnown RBP9.46□□□□□ -0.9
CPSF4-211ENST00000471455 SPATA32Q96LK8 384 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 SLC6A18Q96N87 628 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 SFMBT1Q9UHJ3 866 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 MAPK8IP1Q9UQF2 711 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 HPSEQ9Y251 543 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 CEP83Q9Y592 693 aa9.46□□□□□ -0.9
CPSF4-211ENST00000471455 COL5A1P20908 1838 aaPredicted RBP9.46□□□□□ -0.9
CPSF4-211ENST00000471455 EDDM13A0A1B0GTR0 161 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 O00370 1275 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 SPINT1O43278 529 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 ACSL4O60488 711 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 SIN3BO75182 1162 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 RNASEH2AO75792 299 aaKnown RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 IGLV3-27P01718 113 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 IGHV4-34P06331 123 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 SRPRAP08240 638 aaKnown RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 PAEPP09466 180 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 BMP2P12643 396 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 CD38P28907 300 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 CD70P32970 193 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 NNMTP40261 264 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 CSKP41240 450 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 TBX4P57082 545 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 DAOAP59103 153 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 MCCD1P59942 119 aaPredicted RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 CETN1Q12798 172 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 DPYDQ12882 1025 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 CST6Q15828 149 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 ZCWPW2Q504Y3 356 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 HS1BP3Q53T59 392 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 NCEH1Q6PIU2 408 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 LAYNQ6UX15 382 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 BHLHA9Q7RTU4 235 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 LSM14AQ8ND56 463 aaKnown RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 FIBINQ8TAL6 211 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 SERPINB11Q96P15 392 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 GTPBP4Q9BZE4 634 aaKnown RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 NRSN2Q9GZP1 204 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 STIM2Q9P246 746 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 AK5Q9Y6K8 562 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 SLCO1B1Q9Y6L6 691 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 WDFY3Q8IZQ1 3526 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 GCN1Q92616 2671 aaKnown RBP9.45□□□□□ -0.9
CPSF4-211ENST00000471455 TMEM131Q92545 1883 aa9.45□□□□□ -0.9
CPSF4-211ENST00000471455 A0A1W2PP55 124 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 CAPN8A6NHC0 703 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 TULP2O00295 520 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 PLK4O00444 970 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 KCNK3O14649 394 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 TERTO14746 1132 aaKnown RBP9.44□□□□□ -0.9
CPSF4-211ENST00000471455 CAPN9O14815 690 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 MID1O15344 667 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 APOEP02649 317 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 LTFP02788 710 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 LCP1P13796 627 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 C5AR1P21730 350 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 EPHA8P29322 1005 aaPredicted RBP9.44□□□□□ -0.9
CPSF4-211ENST00000471455 SCTRP47872 440 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 GALCP54803 685 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 OXCT1P55809 520 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 NUCB2P80303 420 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 OVGP1Q12889 678 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 ELAVL3Q14576 367 aaKnown RBP9.44□□□□□ -0.9
CPSF4-211ENST00000471455 FAM133BQ5BKY9 247 aaKnown RBP9.44□□□□□ -0.9
CPSF4-211ENST00000471455 RFWD3Q6PCD5 774 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 LCLAT1Q6UWP7 414 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 DSG4Q86SJ6 1040 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 DHX40Q8IX18 779 aaKnown RBP9.44□□□□□ -0.9
CPSF4-211ENST00000471455 CARNMT1Q8N4J0 409 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 PIP4K2CQ8TBX8 421 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 SAP25Q8TEE9 199 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 NDRG1Q92597 394 aaKnown RBP9.44□□□□□ -0.9
CPSF4-211ENST00000471455 SERAC1Q96JX3 654 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 HSFY1Q96LI6 401 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
CPSF4-211ENST00000471455 ORAI3Q9BRQ5 295 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms