RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 ANAPC4Q9UJX5 808 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 KCND3Q9UK17 655 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 FBXO4Q9UKT5 387 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 DTX4Q9Y2E6 619 aa4.37□□□□□ -1.71
BRCA2-202ENST00000470094 A0A0G2JK05 382 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 A0A1W2PPC1 479 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 KCNJ18B7U540 433 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 H3BNX3 289 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 IPO5O00410 1097 aaKnown RBP4.36□□□□□ -1.71
BRCA2-202ENST00000470094 NDUFB8O95169 186 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 CST5P28325 142 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-202ENST00000470094 POLGP54098 1239 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-202ENST00000470094 OAZ1P54368 228 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 CDK18Q07002 472 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 PRKG1Q13976 671 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 PIK3CD-AS1Q5SR53 167 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 AWAT2Q6E213 333 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 JMJD6Q6NYC1 403 aaPredicted RBP4.36□□□□□ -1.71
BRCA2-202ENST00000470094 KIAA1324Q6UXG2 1013 aaKnown RBP4.36□□□□□ -1.71
BRCA2-202ENST00000470094 SYNE3Q6ZMZ3 975 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 RFX8Q6ZV50 586 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 TRAPPC11Q7Z392 1133 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 TECPR1Q7Z6L1 1165 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 GLCCI1Q86VQ1 547 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 TMEM200AQ86VY9 491 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 OR6Y1Q8NGX8 325 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 IP6K1Q92551 441 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 GOLGA1Q92805 767 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 KAT2AQ92830 837 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 SLC25A28Q96A46 364 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 ARRDC3Q96B67 414 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 VCPIP1Q96JH7 1222 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 ZBTB40Q9NUA8 1239 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 ARL15Q9NXU5 204 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 SRP68Q9UHB9 627 aaKnown RBP4.36□□□□□ -1.71
BRCA2-202ENST00000470094 PCDHA12Q9UN75 941 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 PKP3Q9Y446 797 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 SQORQ9Y6N5 450 aa4.36□□□□□ -1.71
BRCA2-202ENST00000470094 TMEM272A0A1B0GTI8 110 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 FOXO6A8MYZ6 492 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 E7EVH7 732 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 KRT38O76015 456 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 LCKP06239 509 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 VEGFAP15692 232 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-202ENST00000470094 HOXB9P17482 250 aaPredicted RBP4.35□□□□□ -1.71
BRCA2-202ENST00000470094 PRPH2P23942 346 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 CHRNA5P30532 468 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 PMPCAQ10713 525 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 PDCLQ13371 301 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 ALKBH1Q13686 389 aaKnown RBP4.35□□□□□ -1.71
BRCA2-202ENST00000470094 ALG10Q5BKT4 473 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 ALG10BQ5I7T1 473 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 FAM83BQ5T0W9 1011 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 SLC30A9Q6PML9 568 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 GALNT15Q8N3T1 639 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 FSIP1Q8NA03 581 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 NSMCE1Q8WV22 266 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 KCNJ9Q92806 393 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 ARPC5LQ9BPX5 153 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 ABHD16BQ9H3Z7 469 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 FZD3Q9NPG1 666 aa4.35□□□□□ -1.71
BRCA2-202ENST00000470094 A6NNC1 897 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 B4DGG1 531 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 SEPT4O43236 478 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TCEA3O75764 348 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 NEURL1O76050 574 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 EPN2O95208 641 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 CYP21A2P08686 494 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 CHRNB1P11230 501 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TBXAS1P24557 533 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-202ENST00000470094 GSTM2P28161 218 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 GRK6P43250 576 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 MCM2P49736 904 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 PRKAA2P54646 552 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 KRTAP10-11P60412 298 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 DCTN1Q14203 1278 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 SMAD1Q15797 465 aaKnown RBP4.34□□□□□ -1.71
BRCA2-202ENST00000470094 PRTGQ2VWP7 1150 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 GRAMD1BQ3KR37 738 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 LEXMQ3ZCV2 418 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TTLL5Q6EMB2 1281 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 HMBOX1Q6NT76 420 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 SYT13Q7L8C5 426 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 IGFN1Q86VF2 1251 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TMEM199Q8N511 208 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 PTGR2Q8N8N7 351 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-202ENST00000470094 FAM110DQ8TAY7 271 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TMEM174Q8WUU8 243 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 CCT6BQ92526 530 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 MSI2Q96DH6 328 aaKnown RBP4.34□□□□□ -1.71
BRCA2-202ENST00000470094 ZNF419Q96HQ0 510 aaPredicted RBP4.34□□□□□ -1.71
BRCA2-202ENST00000470094 HDHD5Q9BXW7 423 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 FAM234AQ9H0X4 552 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 MYLK2Q9H1R3 596 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TASP1Q9H6P5 420 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 SPAG4Q9NPE6 437 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 G6PC2Q9NQR9 355 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 RCE1Q9Y256 329 aa4.34□□□□□ -1.71
BRCA2-202ENST00000470094 TTC3P53804 2025 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms