RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 FAM20CQ8IXL6 584 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 NIPA2Q8N8Q9 360 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 CXorf38Q8TB03 319 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 TTC9Q92623 222 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 SEMA4DQ92854 862 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 TRIM63Q969Q1 353 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 LENG9Q96B70 501 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 RCN3Q96D15 328 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 RMDN1Q96DB5 314 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 EGLN2Q96KS0 407 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 CIB1Q99828 191 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 NAA50Q9GZZ1 169 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 RNF38Q9H0F5 515 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 COG4Q9H9E3 785 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 POPDC2Q9HBU9 364 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 SCUBE2Q9NQ36 999 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 SMOXQ9NWM0 555 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 FKBP14Q9NWM8 211 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 HSPBP1Q9NZL4 362 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 TBC1D14Q9P2M4 693 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 RABL2AQ9UBK7 228 aaPredicted RBP9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 ZC3H7BQ9UGR2 993 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 DSEQ9UL01 958 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 CNOT6Q9ULM6 557 aaKnown RBP9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 TESMINQ9Y4I5 508 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 SNX13Q9Y5W8 968 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 COL4A1P02462 1669 aa9.21□□□□□ -0.94
SMARCE1-207ENST00000469334 ISPDA4D126 451 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 K7ENM7 598 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 DYRK3O43781 588 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 DNAJB5O75953 348 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 FOSP01100 380 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ENO3P13929 434 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MX2P20592 715 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PRKACBP22694 351 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 RFC1P35251 1148 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 YWHAZP63104 245 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 NOMO3P69849 1222 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MPP1Q00013 466 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 HSPA14Q0VDF9 509 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MERTKQ12866 999 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 TRIM32Q13049 653 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 BMPR2Q13873 1038 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PIGHQ14442 188 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 INAVAQ3KP66 663 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 LRIT3Q3SXY7 679 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PPP6R3Q5H9R7 873 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PERM1Q5SV97 790 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 N4BP2L1Q5TBK1 243 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 IQSEC1Q6DN90 963 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 UGT3A1Q6NUS8 523 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 RFPL4BQ6ZWI9 263 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 CHSY3Q70JA7 882 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ERMP1Q7Z2K6 904 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ARMC8Q8IUR7 673 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 THNSL1Q8IYQ7 743 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MAELQ96JY0 434 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MMP19Q99542 508 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 HSD17B14Q9BPX1 270 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 BEGAINQ9BUH8 593 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SEMA6AQ9H2E6 1030 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ZNF385DQ9H6B1 395 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■■■■ 27.2
SMARCE1-207ENST00000469334 C12orf10Q9HB07 376 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 NEK6Q9HC98 313 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ENPP5Q9UJA9 477 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PACSIN3Q9UKS6 424 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 EMCNQ9ULC0 261 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ZBTB1Q9Y2K1 713 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PCDHGA3Q9Y5H0 932 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PTPRFP10586 1907 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ARHGEF35A5YM69 484 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 TMEM191CA6NGB0 347 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 CXorf49A8MYA2 514 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 AVILO75366 819 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 TMEM191BP0C7N4 346 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MSL3P1P0C860 447 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 MBL2P11226 248 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 CYP19A1P11511 503 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 OSBPP22059 807 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 HOXD10P28358 340 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SERPINB5P36952 375 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SREBF1P36956 1147 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 GRIA3P42263 894 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 GPD2P43304 727 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 PHC1P78364 1004 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 NAB1Q13506 487 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SNX17Q15036 470 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 DLG2Q15700 870 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 GRIK5Q16478 980 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 TAZQ16635 292 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ATP13A4Q4VNC1 1196 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 HMBOX1Q6NT76 420 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 KIAA0408Q6ZU52 694 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 CYS1Q717R9 158 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SIX5Q8N196 739 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC7A3Q8WY07 619 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 GLT1D1Q96MS3 346 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms