RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 STAG3L1P0CL83 205 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 MLLT6P55198 1093 aaPredicted RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 HSPA14Q0VDF9 509 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 MOGSQ13724 837 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 TRIP10Q15642 601 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 MOGQ16653 247 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ZNF829Q3KNS6 432 aaPredicted RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 DUSP28Q4G0W2 176 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CYP4A22Q5TCH4 519 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 KRT39Q6A163 491 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CORO6Q6QEF8 472 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ABI1Q8IZP0 508 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ATP6V0D2Q8N8Y2 350 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 FBXL13Q8NEE6 735 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 C18orf25Q96B23 403 aaPredicted RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 MRRFQ96E11 262 aaKnown RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 MRPS26Q9BYN8 205 aaKnown RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 TRIM55Q9BYV6 548 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 MOCS1Q9NZB8 636 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 COQ3Q9NZJ6 369 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 PPM1HQ9ULR3 514 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ATP6V1G2-DDX39BF2Z307 99 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 HCRTO43612 131 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 BRAFP15056 766 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CD52P31358 61 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 FKBP1BP68106 108 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 EFTUD2Q15029 972 aaKnown RBP eCLIP10.17□□□□□ -0.78
NUP50-214ENST00000469163 TAPT1Q6NXT6 567 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 UNC5DQ6UXZ4 953 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 CYP2U1Q7Z449 544 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ST13P5Q8NFI4 369 aaPredicted RBP10.17□□□□□ -0.78
NUP50-214ENST00000469163 SEMA4DQ92854 862 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 TRIM51Q9BSJ1 452 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 S100A14Q9HCY8 104 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 RAB20Q9NX57 234 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 TAS2R14Q9NYV8 317 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ARHGAP20Q9P2F6 1191 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 ARHGAP26Q9UNA1 814 aa10.17□□□□□ -0.78
NUP50-214ENST00000469163 TIAM2Q8IVF5 1701 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A9O60656 530 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 NFICP08651 508 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 RBP3P10745 1247 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ARF4P18085 180 aaPredicted RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A6P19224 532 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A1P22309 533 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A4P22310 534 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 CXCR2P25025 360 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A3P35503 534 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A5P35504 534 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 PSEN2P49810 448 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 CPT1AP50416 773 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 METTL3Q86U44 580 aaKnown RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 PDSS2Q86YH6 399 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 TRIM59Q8IWR1 403 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 CHPT1Q8WUD6 406 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 SDCCAG3Q96C92 435 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 RNF39Q9H2S5 420 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 PABPC3Q9H361 631 aaKnown RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A7Q9HAW7 530 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A10Q9HAW8 530 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 UGT1A8Q9HAW9 530 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 MRPL39Q9NYK5 338 aaKnown RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 ATP6V1HQ9UI12 483 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 DCTN4Q9UJW0 460 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 SOX13Q9UN79 622 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 MAGED2Q9UNF1 606 aaPredicted RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 SIK3Q9Y2K2 1263 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.16□□□□□ -0.78
NUP50-214ENST00000469163 PTCH2Q9Y6C5 1203 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 XIRP2A4UGR9 3374 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ILVBLA1L0T0 632 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 GRID2IPA4D2P6 1211 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 C2orf81A6NN90 581 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 SOBPA7XYQ1 873 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 KLHL2O95198 593 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 INHAP05111 366 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 EDN1P05305 212 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 NR1H2P55055 460 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 IFITM2Q01629 132 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ZNF792Q3KQV3 632 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 CCDC14Q49A88 953 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 PERM1Q5SV97 790 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 IER5Q5VY09 327 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 FAM122CQ6P4D5 195 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 SRRM1Q8IYB3 904 aaKnown RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 HIPK4Q8NE63 616 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ZNF507Q8TCN5 953 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 DDI1Q8WTU0 396 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 GAD1Q99259 594 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 CXCL16Q9H2A7 254 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ADNPQ9H2P0 1102 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 OSGEPQ9NPF4 335 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ARMC1Q9NVT9 282 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 ADAMTS5Q9UNA0 930 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 VCANP13611 3396 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 SLC10A3P09131 477 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 IQCF3P0C7M6 154 aa10.16□□□□□ -0.78
NUP50-214ENST00000469163 HNRNPFP52597 415 aaKnown RBP10.16□□□□□ -0.78
NUP50-214ENST00000469163 NCKAP1LP55160 1127 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms