RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 PABPC3Q9H361 631 aaKnown RBP7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 C6orf106Q9H6K1 298 aaPredicted RBP7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 NLRC4Q9NPP4 1024 aa7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 PIGVQ9NUD9 493 aa7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 FBXL12Q9NXK8 326 aa7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 VPS28Q9UK41 221 aa7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 DAAM1Q9Y4D1 1078 aa7.4□□□□□ -1.22
SNRPD3-205ENST00000468770 CKAP5Q14008 2032 aa7.4□□□□□ -1.23
SNRPD3-205ENST00000468770 TNRC6BQ9UPQ9 1833 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 A0A1W2PP55 124 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 FAM47DPA6NHR8 397 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 LRRC10BA6NIK2 292 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 LRRC72A6NJI9 287 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 UPK3BL1B0FP48 263 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 UPK3BL2E5RIL1 263 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 MID1O15344 667 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SRGAP2O75044 1071 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 RNASEH2AO75792 299 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 ADCY5O95622 1261 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 IL1BP01584 269 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 TFE3P19532 575 aaPredicted RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CD27P26842 260 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SLC8A1P32418 973 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 RDXP35241 583 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SOX5P35711 763 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 GGCXP38435 758 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CSNK1EP49674 416 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 STK19P49842 368 aaPredicted RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 AFF3P51826 1226 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 COPB1P53618 953 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CDH4P55283 916 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 NOMO3P69849 1222 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SIM1P81133 766 aaPredicted RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CDR2Q01850 454 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CENPCQ03188 943 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 UBXN1Q04323 297 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 FOXC1Q12948 553 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 GRIK2Q13002 908 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 HNRNPDQ14103 355 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 ELAVL3Q14576 367 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SYCP1Q15431 976 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 TEAD4Q15561 434 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CST6Q15828 149 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CCDC183Q5T5S1 534 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 ACBD5Q5T8D3 534 aaPredicted RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CXorf57Q6NSI4 855 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 IL27RAQ6UWB1 636 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 C14orf80Q86SX3 495 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 PIP4P1Q86T03 277 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 STK40Q8N2I9 435 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 PIAS4Q8N2W9 510 aaPredicted RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 NEK11Q8NG66 645 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 EPS8L1Q8TE68 723 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SLC20A1Q8WUM9 679 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 PTPRN2Q92932 1015 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 NT5C3BQ969T7 300 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 BIRC7Q96CA5 298 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 C1orf74Q96LT6 269 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 FAM129BQ96TA1 746 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 TBCBQ99426 244 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 FEM1AQ9BSK4 669 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 MUC3BQ9H195 1237 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 NEUROG2Q9H2A3 272 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 GANQ9H2C0 597 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 GAREM1Q9H706 876 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 DNAAF2Q9NVR5 837 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 ARHGEF38Q9NXL2 777 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 LIMA1Q9UHB6 759 aaKnown RBP7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 SLC25A13Q9UJS0 675 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 TBC1D30Q9Y2I9 924 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 PCDHB9Q9Y5E1 797 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 LAMA1P25391 3075 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 ACACBO00763 2458 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 PCNX2A6NKB5 2137 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 ADAMTS9Q9P2N4 1935 aa7.39□□□□□ -1.23
SNRPD3-205ENST00000468770 CACNA1EQ15878 2313 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 KNL1Q8NG31 2342 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 ITIH6Q6UXX5 1313 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 SPAARA0A1B0GVQ0 90 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 A0A1B0GVT2 93 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 LGALS16A8MUM7 142 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 EPHB6O15197 1021 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 BNIP3LO60238 219 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 SH3BP5O60239 455 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 CNTN5O94779 1100 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 CER1O95813 267 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 ADH1BP00325 375 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 CYP1A1P04798 512 aaPredicted RBP7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 RHOCP08134 193 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 CD59P13987 128 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 GOT1P17174 413 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 C5AR1P21730 350 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 MMP8P22894 467 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 FLT3P36888 993 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 PSMD8P48556 350 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 IRAK1P51617 712 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 GALCP54803 685 aa7.38□□□□□ -1.23
SNRPD3-205ENST00000468770 JAM2P57087 298 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms