RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DCXO43602 365 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 RAMP2O60895 175 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 APODP05090 189 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 CISD3P0C7P0 127 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 PYGMP11217 842 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 PABPC1P11940 636 aaKnown RBP15.61■□□□□ 0.09
SNIP1-202ENST00000468040 GRIA2P42262 883 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 SLC6A11P48066 632 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 NDST2P52849 883 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 YBEYP58557 167 aaPredicted RBP15.61■□□□□ 0.09
SNIP1-202ENST00000468040 ETF1P62495 437 aaKnown RBP15.61■□□□□ 0.09
SNIP1-202ENST00000468040 GRSF1Q12849 480 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNIP1-202ENST00000468040 LMAN2Q12907 356 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 DMC1Q14565 340 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 PARP15Q460N3 678 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 FSCBQ5H9T9 825 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 SEL1L2Q5TEA6 688 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 DCAF12L1Q5VU92 463 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 ZNF852Q6ZMS4 543 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 NYAP1Q6ZVC0 841 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 RFX6Q8HWS3 928 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 PHTF2Q8N3S3 785 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 TERB1Q8NA31 727 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 WFDC5Q8TCV5 224 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 WDR24Q96S15 920 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 OSBPL8Q9BZF1 889 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 MUC3BQ9H195 1237 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 MAGEH1Q9H213 219 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 GGA2Q9UJY4 613 aa15.61■□□□□ 0.09
SNIP1-202ENST00000468040 MRPS17Q9Y2R5 130 aaKnown RBP15.61■□□□□ 0.09
SNIP1-202ENST00000468040 CTAGE9A4FU28 777 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 TJP3O95049 919 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 KAT7O95251 611 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 TUBB4AP04350 444 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 ATP1A1P05023 1023 aaKnown RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 ALADP13716 330 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 DRD1P21728 446 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 CD70P32970 193 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 CSKP41240 450 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 GALK1P51570 392 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 PLK1P53350 603 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 GNA12Q03113 381 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 KDSRQ06136 332 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 ZNF211Q13398 564 aaPredicted RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 POLD3Q15054 466 aaPredicted RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 EIF4HQ15056 248 aaKnown RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 PAFAH1B3Q15102 231 aaKnown RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 IER5LQ5T953 404 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 RNF219Q5W0B1 726 aaPredicted RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 KAZNQ674X7 775 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 NCBP2-AS2Q69YL0 99 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 SLC9A4Q6AI14 798 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 ASTLQ6HA08 431 aaPredicted RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 TXNDC11Q6PKC3 985 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 KIAA0907Q7Z7F0 614 aaPredicted RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 SIX5Q8N196 739 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 PQLC3Q8N755 202 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 LMLNQ96KR4 655 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 NAPGQ99747 312 aaPredicted RBP15.6■□□□□ 0.09
SNIP1-202ENST00000468040 FEM1AQ9BSK4 669 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 NDFIP2Q9NV92 336 aa15.6■□□□□ 0.09
SNIP1-202ENST00000468040 A0A0A0MRY4 1105 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 TBC1D3BA6NDS4 549 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 KIF2AO00139 706 aaPredicted RBP15.59■□□□□ 0.09
SNIP1-202ENST00000468040 TIMM44O43615 452 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 CST8O60676 142 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 KRT10P13645 584 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 TCP1P17987 556 aaKnown RBP15.59■□□□□ 0.09
SNIP1-202ENST00000468040 STARD6P59095 220 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 SIGLEC14Q08ET2 396 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 PON2Q15165 354 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 E2F5Q15329 346 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 GEN1Q17RS7 908 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 PLEKHG6Q3KR16 790 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 TMEM196Q5HYL7 178 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 PITRM1Q5JRX3 1037 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 AFMIDQ63HM1 303 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 NAIF1Q69YI7 327 aaPredicted RBP15.59■□□□□ 0.09
SNIP1-202ENST00000468040 NPWQ8N729 165 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 DCAF4L2Q8NA75 395 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 OR52K2Q8NGK3 314 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 CCDC26Q8TAB7 109 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 EDAQ92838 391 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 PBKQ96KB5 322 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 C16orf45Q96MC5 204 aaPredicted RBP15.59■□□□□ 0.09
SNIP1-202ENST00000468040 NELL2Q99435 816 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 PSMB7Q99436 277 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 C2orf49Q9BVC5 232 aaPredicted RBP15.59■□□□□ 0.09
SNIP1-202ENST00000468040 KLC2Q9H0B6 622 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 LRRC19Q9H756 370 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 VPS28Q9UK41 221 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 HPCAL4Q9UM19 191 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 SNX12Q9UMY4 172 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 RAD54BQ9Y620 910 aa15.59■□□□□ 0.09
SNIP1-202ENST00000468040 A0A0D9SEW6 157 aa15.58■□□□□ 0.08
SNIP1-202ENST00000468040 KRBA1A5PL33 1030 aa15.58■□□□□ 0.08
SNIP1-202ENST00000468040 ARHGAP42A6NI28 874 aa15.58■□□□□ 0.08
SNIP1-202ENST00000468040 RASA4BC9J798 803 aa15.58■□□□□ 0.08
SNIP1-202ENST00000468040 TRIM24O15164 1050 aa15.58■□□□□ 0.08
SNIP1-202ENST00000468040 RASA4O43374 803 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms