RNA–Protein interactions for RNA: ENST00000467908.1

PDXK-209, Transcript of pyridoxal kinase, human

TSL 3 BASIC

Gene PDXK, Length 7,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDXK-209	ENST00000467908	TSPAN18	Q96SJ8	248 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	C6orf62	Q9GZU0	229 aa	Predicted RBP	11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	MCCC2	Q9HCC0	563 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	AVEN	Q9NQS1	362 aa	Predicted RBP	11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	FBXO9	Q9UK97	447 aa	Predicted RBP	11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	SCAMP1	O15126	338 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	KATNA1	O75449	491 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	HMGCR	P04035	888 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	GJB1	P08034	283 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	CLTB	P09497	229 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	SARS	P49591	514 aa	Known RBP	11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	POU4F1	Q01851	419 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	FAR1	Q8WVX9	515 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	C1orf54	Q8WWF1	131 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	CNDP1	Q96KN2	507 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	MRPL1	Q9BYD6	325 aa	Known RBP	11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	DDX47	Q9H0S4	455 aa	Known RBP	11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	ATXN3L	Q9H3M9	355 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	POLR1B	Q9H9Y6	1135 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.51	□□□□□ -0.57	3e-9	■■■□□ 18.1
PDXK-209	ENST00000467908	VAV3	Q9UKW4	847 aa		11.51	□□□□□ -0.57
PDXK-209	ENST00000467908	PPP1R3G	B7ZBB8	358 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	PTGS2	P35354	604 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	KYAT1	Q16773	422 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	RAP1GAP2	Q684P5	730 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ATG14	Q6ZNE5	492 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	KIAA0408	Q6ZU52	694 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	REM2	Q8IYK8	340 aa	Predicted RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	POP1	Q99575	1024 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	THG1L	Q9NWX6	298 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	PRKAG3	Q9UGI9	489 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	TSPAN4	O14817	238 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	EXTL3	O43909	919 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	MUT	P22033	750 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	HOXC12	P31275	282 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	NCAPH	Q15003	741 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ETNPPL	Q8TBG4	499 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ZNF354B	Q96LW1	612 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	CLCC1	Q96S66	551 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	THUMPD3	Q9BV44	507 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	COLEC11	Q9BWP8	271 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	KCNF1	Q9H3M0	494 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	WBP11	Q9Y2W2	641 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	TUFM	P49411	452 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	SEMA3A	Q14563	771 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	SH3D19	Q5HYK7	790 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	TPGS1	Q6ZTW0	290 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	FAM20C	Q8IXL6	584 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	TOP1MT	Q969P6	601 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	SGF29	Q96ES7	293 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	PMPCB	O75439	489 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	RIN1	Q13671	783 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ZNF720	Q7Z2F6	126 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	RNF31	Q96EP0	1072 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	RNF112	Q9ULX5	631 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	C2CD2	Q9Y426	696 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ECM29	Q5VYK3	1845 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ATP6V1G2	O95670	118 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	CTNNB1	P35222	781 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	PRKAG1	P54619	331 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	FSTL1	Q12841	308 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	THOC7	Q6I9Y2	204 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	IZUMO2	Q6UXV1	221 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ENKUR	Q8TC29	256 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	C8orf4	Q9NR00	106 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	EVA1B	Q9NVM1	165 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ZNHIT2	Q9UHR6	403 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ADGRG1	Q9Y653	693 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	APRT	P07741	180 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	SMIM10L2A	P0DMW4	78 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	SMIM10L2B	P0DMW5	78 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	CLEC16A	Q2KHT3	1053 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ANKRD7	Q92527	254 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ELMO3	Q96BJ8	720 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	SLITRK1	Q96PX8	696 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	TRAPPC9	Q96Q05	1148 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	NEK6	Q9HC98	313 aa		11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	TLR8	Q9NR97	1041 aa	Known RBP	11.5	□□□□□ -0.57
PDXK-209	ENST00000467908	ZNF862	O60290	1169 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	KLHL41	O60662	606 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	FARP2	O94887	1054 aa	Predicted RBP	11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	SMPDL3B	Q92485	455 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	FBXO32	Q969P5	355 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	CMTM5	Q96DZ9	223 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908		A0A1B0GUL6	1792 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	DCLK1	O15075	740 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	TP73	O15350	636 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	MSC	O60682	206 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	S100A1	P23297	94 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	RAP1GAP	P47736	663 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	FMO5	P49326	533 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	KLK7	P49862	253 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	ALKBH5	Q6P6C2	394 aa	Known RBP	11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	TMEM110	Q86TL2	294 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	TRIM74	Q86UV6	250 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	TRIM73	Q86UV7	250 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	TMEM35B	Q8NCS4	154 aa		11.49	□□□□□ -0.57
PDXK-209	ENST00000467908	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.49	□□□□□ -0.57	2e-7	■□□□□ 10.6

Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms