RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SHROOM3Q8TF72 1996 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 PIBF1Q8WXW3 757 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 ST8SIA2Q92186 375 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 RRP36Q96EU6 259 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 FAM167AQ96KS9 214 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 ZNF512Q96ME7 567 aaPredicted RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 WDR92Q96MX6 357 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 MBOAT7Q96N66 472 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 PIEZO2Q9H5I5 2752 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 PSTPIP2Q9H939 334 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 CYP4F11Q9HBI6 524 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 AGO4Q9HCK5 861 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 ZNF302Q9NR11 478 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 HEBP1Q9NRV9 189 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.59□□□□□ -1.67
SSR3-204ENST00000467733 FNIP2Q9P278 1114 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 SEC63Q9UGP8 760 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 CNTNAP2Q9UHC6 1331 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 FBXW11Q9UKB1 542 aa4.59□□□□□ -1.67
SSR3-204ENST00000467733 NDRG2Q9UN36 371 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 PIN4Q9Y237 131 aaKnown RBP4.59□□□□□ -1.67
SSR3-204ENST00000467733 PTPRQQ9UMZ3 2332 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 COL6A6A6NMZ7 2263 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 URB1O60287 2271 aaKnown RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 ABCA7Q8IZY2 2146 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 NUP210Q8TEM1 1887 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 MYO16Q9Y6X6 1858 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 K7ESF4 209 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 DDX39AO00148 427 aaKnown RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 NRP1O14786 923 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 NRP2O60462 931 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 TOX4O94842 621 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 GYPEP15421 78 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 HOXA6P31267 233 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 SESN3P58005 492 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 TROAPQ12815 778 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 FAPQ12884 760 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 IMMTQ16891 758 aaKnown RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 LONRF3Q496Y0 759 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 TIGD2Q4W5G0 525 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 CEP55Q53EZ4 464 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 LIN9Q5TKA1 542 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 EFCAB12Q6NXP0 572 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 OLFML1Q6UWY5 402 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 CYB5R4Q7L1T6 521 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 NIPA1Q7RTP0 329 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 TAS1R1Q7RTX1 841 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 APBB1IPQ7Z5R6 666 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 CLEC14AQ86T13 490 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 WDR5BQ86VZ2 330 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 PALB2Q86YC2 1186 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 SPEM1Q8N4L4 309 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 ITFG1Q8TB96 612 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 ZNF668Q96K58 619 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 FAM193BQ96PV7 902 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 EDEM2Q9BV94 578 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 SCNM1Q9BWG6 230 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 GCOM2Q9BZD3 368 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 PITHD1Q9GZP4 211 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 ARRDC1-AS1Q9H2J1 176 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 RSAD1Q9HA92 442 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 ANKFY1Q9P2R3 1169 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 MAGEL2Q9UJ55 1249 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 PCDHA6Q9UN73 950 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 PRG3Q9Y2Y8 225 aaPredicted RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 NEUROG3Q9Y4Z2 214 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 PCDHGA5Q9Y5G8 931 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 COL12A1Q99715 3063 aa4.58□□□□□ -1.68
SSR3-204ENST00000467733 TNRC6BQ9UPQ9 1833 aaKnown RBP4.58□□□□□ -1.68
SSR3-204ENST00000467733 GOLGA4Q13439 2230 aaKnown RBP4.57□□□□□ -1.68
SSR3-204ENST00000467733 TRIP11Q15643 1979 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 A0A0A6YYJ9 748 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 ERICH2A1L162 156 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 INO80B-WBP1J3KQ70 363 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 NEMP1O14524 444 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 CCL16O15467 120 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 OPHN1O60890 802 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 DNAJC6O75061 913 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 CSDE1O75534 798 aaKnown RBP4.57□□□□□ -1.68
SSR3-204ENST00000467733 FSBPO95073 299 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 PCDH8O95206 1070 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 TOP3BO95985 862 aaKnown RBP4.57□□□□□ -1.68
SSR3-204ENST00000467733 POMCP01189 267 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 ALDH2P05091 517 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 RPL17P18621 184 aaKnown RBP4.57□□□□□ -1.68
SSR3-204ENST00000467733 NR4A1P22736 598 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 FCARP24071 287 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 SMARCA1P28370 1054 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 MPLP40238 635 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 PDE1AP54750 535 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 NPEPPSP55786 919 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 DSC1Q08554 894 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 SPIDRQ14159 915 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 USP41Q3LFD5 358 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 PABPC1LQ4VXU2 614 aaKnown RBP4.57□□□□□ -1.68
SSR3-204ENST00000467733 COLEC12Q5KU26 742 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 PPM1LQ5SGD2 360 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 SWSAP1Q6NVH7 229 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 FUT10Q6P4F1 479 aa4.57□□□□□ -1.68
SSR3-204ENST00000467733 ZNF410Q86VK4 478 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms