RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 AGFG2O95081 481 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 P4HA1P13674 534 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 PRLRP16471 622 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 UGT1A5P35504 534 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 LONP1P36776 959 aaKnown RBP10.61□□□□□ -0.71
HDAC3-203ENST00000467533 CYP2J2P51589 502 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 POLE2P56282 527 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 HNRNPKP61978 463 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC3-203ENST00000467533 YWHAGP61981 247 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ARID5BQ14865 1188 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 NR0B2Q15466 257 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 PERM1Q5SV97 790 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ADGRF1Q5T601 910 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 RNF219Q5W0B1 726 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-203ENST00000467533 BORAQ6PGQ7 559 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 STXBP4Q6ZWJ1 553 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 RAB11FIP2Q7L804 512 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 CRYBG2Q8N1P7 616 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ZNF548Q8NEK5 533 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-203ENST00000467533 OR13H1Q8NG92 308 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 WDR48Q8TAF3 677 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 SPATA20Q8TB22 786 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ZNF516Q92618 1163 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 TTC17Q96AE7 1141 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 CYFIP2Q96F07 1278 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 FZD3Q9NPG1 666 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 STIM2Q9P246 746 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 STK17AQ9UEE5 414 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ACSL6Q9UKU0 697 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ERVW-1Q9UQF0 538 aa10.61□□□□□ -0.71
HDAC3-203ENST00000467533 ITIH6Q6UXX5 1313 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 LRBAP50851 2863 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 EME2A4GXA9 379 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 H3BM21 787 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 CASC3O15234 703 aaKnown RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 LATS1O95835 1130 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 SRPRAP08240 638 aaKnown RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 JMJD7P0C870 316 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 HGFP14210 728 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 WT1P19544 449 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 CTSOP43234 321 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 METAP1P53582 386 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 EIF3IQ13347 325 aaKnown RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 NCOA4Q13772 614 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 ELAVL3Q14576 367 aaKnown RBP10.6□□□□□ -0.71
HDAC3-203ENST00000467533 DEFB133Q30KQ1 61 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 RFWD3Q6PCD5 774 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 SV2BQ7L1I2 683 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 UNC93AQ86WB7 457 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 KDM1BQ8NB78 822 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 TMEM145Q8NBT3 493 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 KLK6Q92876 244 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 STRADBQ9C0K7 418 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 PANK4Q9NVE7 773 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 PISDQ9UG56 409 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 PCDHB11Q9Y5F2 797 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 USP3Q9Y6I4 520 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 NBASA2RRP1 2371 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 C2CD3Q4AC94 2353 aa10.6□□□□□ -0.71
HDAC3-203ENST00000467533 TYW5A2RUC4 315 aaKnown RBP10.59□□□□□ -0.71
HDAC3-203ENST00000467533 AKT2P31751 481 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CASP4P49662 377 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CDH18Q13634 790 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 PITRM1Q5JRX3 1037 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 MPP7Q5T2T1 576 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 PTAR1Q7Z6K3 402 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-203ENST00000467533 B3GNT8Q7Z7M8 397 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CCDC117Q8IWD4 279 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-203ENST00000467533 SLC22A18ASQ8N1D0 253 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CARNMT1Q8N4J0 409 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 GLMNQ92990 594 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 NAT6Q93015 286 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 MIB2Q96AX9 1013 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 IFT43Q96FT9 208 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 NOX5Q96PH1 765 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 TWNKQ96RR1 684 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CCDC3Q9BQI4 270 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 PREBQ9HCU5 417 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 OLA1Q9NTK5 396 aaKnown RBP10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 SFMBT1Q9UHJ3 866 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 TUBD1Q9UJT1 453 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 STOML2Q9UJZ1 356 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 INTS6Q9UL03 887 aaKnown RBP10.59□□□□□ -0.71
HDAC3-203ENST00000467533 HBS1LQ9Y450 684 aaKnown RBP10.59□□□□□ -0.71
HDAC3-203ENST00000467533 RP1P56715 2156 aa10.59□□□□□ -0.71
HDAC3-203ENST00000467533 CACNA1DQ01668 2161 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 A1L4Q6 167 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 FRMD3A2A2Y4 597 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 A6NNZ2 444 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 AQP9O43315 295 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 MSI1O43347 362 aaKnown RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 MOCS3O95396 460 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 POU3F2P20265 443 aaPredicted RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 HNRNPA2B1P22626 353 aaKnown RBP10.58□□□□□ -0.72
HDAC3-203ENST00000467533 TNFRSF8P28908 595 aa10.58□□□□□ -0.72
HDAC3-203ENST00000467533 RPIAP49247 311 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms