RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DUSP10Q9Y6W6 482 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PMF1-BGLAPU3KQ54 211 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PIEZO2Q9H5I5 2752 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PTPRBP23467 1997 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 PTPRDP23468 1912 aa5.86□□□□□ -1.47
PTCD3-207ENST00000467273 NPHP3-ACAD11A0A0J9YXS1 232 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 SMIM28A0A1B0GU29 152 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 LRRIQ4A6NIV6 560 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 OR6C75A6NL08 312 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 TTC36A6NLP5 189 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 CYSRT1A8MQ03 144 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 I3L4J1 428 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 PODXLO00592 558 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ADAMTS3O15072 1205 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ARHGAP6O43182 974 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 GJB3O75712 270 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 TDP2O95551 362 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 PRB1P04280 392 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 CFIP05156 583 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 HSP90AA1P07900 732 aaKnown RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 KCNE1P15382 129 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 POU3F2P20265 443 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 BCKDHBP21953 392 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 GABRR2P28476 465 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 MARCKSP29966 332 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 GJA4P35212 333 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 AVPR1AP37288 418 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 TUFMP49411 452 aaKnown RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 EFNA5P52803 228 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 GPR85P60893 370 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 MRPS21P82921 87 aaKnown RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 YWHAHQ04917 246 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 KCNAB2Q13303 367 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 VEPH1Q14D04 833 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 SEPT7Q16181 437 aaKnown RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 CRY1Q16526 586 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 STXBP5Q5T5C0 1151 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 TTC22Q5TAA0 569 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ANO7Q6IWH7 933 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ABHD17CQ6PCB6 329 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ALKAL1Q6UXT8 129 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 DNAJB7Q7Z6W7 309 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 NOSTRINQ8IVI9 506 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 NAXDQ8IW45 347 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 AHI1Q8N157 1196 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 AFAP1L2Q8N4X5 818 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 MINDY1Q8N5J2 469 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 FNIP1Q8TF40 1166 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ATP2A3Q93084 1043 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 GJA10Q969M2 543 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 CCDC43Q96MW1 224 aaKnown RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 FNBP1Q96RU3 617 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ZFYVE21Q9BQ24 234 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 CCDC94Q9BW85 323 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 LRRC2Q9BYS8 371 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 SCAND2PQ9GZW5 306 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 FAM124BQ9H5Z6 455 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-207ENST00000467273 PRORYQ9H606 182 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 TMEM74BQ9NUR3 256 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 TDP1Q9NUW8 608 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 IMPACTQ9P2X3 320 aa5.85□□□□□ -1.47
PTCD3-207ENST00000467273 ASXL3Q9C0F0 2248 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 TEX15Q9BXT5 2789 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 PHLPP2Q6ZVD8 1323 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 TSC2P49815 1807 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 KLF18A0A0U1RQI7 1052 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 M0QZQ0 153 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 CBFA2T3O75081 653 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 SLITRK3O94933 977 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 ITGB3P05106 788 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 ZNF883P0CG24 379 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 GSPT1P15170 499 aaKnown RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 PTGER3P43115 390 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 NAMPTP43490 491 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 MAPKAPK2P49137 400 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 RARRES1P49788 294 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 NLRP5P59047 1200 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 EXOSC10Q01780 885 aaKnown RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 CFHR1Q03591 330 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 BFSP1Q12934 665 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 PPP2R5AQ15172 486 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 GLRA4Q5JXX5 417 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 CREB3L3Q68CJ9 461 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 CENPPQ6IPU0 288 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 ZCCHC8Q6NZY4 707 aaKnown RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 SLCO6A1Q86UG4 719 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 KIAA1958Q8N8K9 716 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 NAT16Q8N8M0 369 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 TMEM52Q8NDY8 209 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 MDGA1Q8NFP4 955 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.84□□□□□ -1.471e-15■■□□□ 12.9
PTCD3-207ENST00000467273 USP33Q8TEY7 942 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 HSD17B14Q9BPX1 270 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 ANP32EQ9BTT0 268 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 POLR3CQ9BUI4 534 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 GTPBP2Q9BX10 602 aaKnown RBP5.84□□□□□ -1.47
PTCD3-207ENST00000467273 TPSD1Q9BZJ3 242 aa5.84□□□□□ -1.47
PTCD3-207ENST00000467273 POLR3FQ9H1D9 316 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms