RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 INTS2Q9H0H0 1204 aaKnown RBP13.11□□□□□ -0.31
UBR4-210ENST00000466969 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 OSER1Q9NX31 292 aa13.11□□□□□ -0.31
UBR4-210ENST00000466969 PRRC2CQ9Y520 2896 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 TARSL2A2RTX5 802 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 SLC7A4O43246 635 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 PLRG1O43660 514 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 DUX1O43812 170 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 NADKO95544 446 aaPredicted RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 CSF2P04141 144 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 RPLP0P05388 317 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 NME1P15531 152 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 ITGB7P26010 798 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 AKT2P31751 481 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 CCL7P80098 99 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 DCP2Q8IU60 420 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 CACNA2D3Q8IZS8 1091 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 SLC22A18ASQ8N1D0 253 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBR4-210ENST00000466969 POMGNT1Q8WZA1 660 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 SMARCD1Q96GM5 515 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 CPEB1Q9BZB8 566 aaKnown RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.1□□□□□ -0.31
UBR4-210ENST00000466969 AKAP7Q9P0M2 348 aaPredicted RBP13.1□□□□□ -0.31
UBR4-210ENST00000466969 MAP10Q9P2G4 905 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 SIX4Q9UIU6 781 aa13.1□□□□□ -0.31
UBR4-210ENST00000466969 A8MXQ7 604 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 TISP43B9A030 160 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 PRLRP16471 622 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 ABCD1P33897 745 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.312e-12■■■□□ 16.2
UBR4-210ENST00000466969 AAMPQ13685 434 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 KRT79Q5XKE5 535 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 CEP135Q66GS9 1140 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 KIAA0907Q7Z7F0 614 aaPredicted RBP13.09□□□□□ -0.31
UBR4-210ENST00000466969 FAM35AQ86V20 835 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 SDR16C5Q8N3Y7 309 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 WASF1Q92558 559 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 KIAA1143Q96AT1 154 aaPredicted RBP13.09□□□□□ -0.31
UBR4-210ENST00000466969 ZNF274Q96GC6 653 aaPredicted RBP13.09□□□□□ -0.31
UBR4-210ENST00000466969 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 MTMR12Q9C0I1 747 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 RASAL2Q9UJF2 1139 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
UBR4-210ENST00000466969 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 JAK2O60674 1132 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 AP1G2O75843 785 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 LUC7L3O95232 432 aaKnown RBP13.08□□□□□ -0.32
UBR4-210ENST00000466969 HNRNPA2B1P22626 353 aaKnown RBP13.08□□□□□ -0.32
UBR4-210ENST00000466969 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
UBR4-210ENST00000466969 DRD3P35462 400 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 UGT1A3P35503 534 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 WNT7BP56706 349 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 MC1RQ01726 317 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 POSTNQ15063 836 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 Q6ZSR6 202 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 PTAR1Q7Z6K3 402 aaPredicted RBP13.08□□□□□ -0.32
UBR4-210ENST00000466969 PARGQ86W56 976 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 BRSK2Q8IWQ3 736 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 MYCT1Q8N699 235 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 FAM174AQ8TBP5 190 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 KLK6Q92876 244 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 MYO19Q96H55 970 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 ANKRD36BP1Q96IX9 119 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 FAM84AQ96KN4 292 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 NOX5Q96PH1 765 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 EFHD1Q9BUP0 239 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 GPN2Q9H9Y4 310 aaPredicted RBP13.08□□□□□ -0.32
UBR4-210ENST00000466969 FZD3Q9NPG1 666 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 LATS2Q9NRM7 1088 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 KCND2Q9NZV8 630 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 IPO11Q9UI26 975 aaKnown RBP13.08□□□□□ -0.32
UBR4-210ENST00000466969 NAGPAQ9UK23 515 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 SCML2Q9UQR0 700 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 KCTD3Q9Y597 815 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 NME7Q9Y5B8 376 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 STYXL1Q9Y6J8 313 aa13.08□□□□□ -0.32
UBR4-210ENST00000466969 A0A1W2PQH9 124 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 A6NNZ2 444 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 TACC1O75410 805 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 ASLP04424 464 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 RALAP11233 206 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 JUNDP17535 347 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 MZF1P28698 734 aaPredicted RBP13.07□□□□□ -0.32
UBR4-210ENST00000466969 CLDN2P57739 230 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 ARID5BQ14865 1188 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 ZNF174Q15697 407 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 INPP5JQ15735 1006 aaPredicted RBP13.07□□□□□ -0.32
UBR4-210ENST00000466969 OR6B2Q6IFH4 312 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 STK40Q8N2I9 435 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 CCDC74AQ96AQ1 378 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 CDK5RAP1Q96SZ6 601 aaKnown RBP13.07□□□□□ -0.32
UBR4-210ENST00000466969 CGRRF1Q99675 332 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 LRRN3Q9H3W5 708 aa13.07□□□□□ -0.32
UBR4-210ENST00000466969 NMUR1Q9HB89 426 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms