RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 UBA2Q9UBT2 640 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 BARX2Q9UMQ3 279 aaPredicted RBP8.88□□□□□ -0.99
HPS4-209ENST00000466781 GPSM3Q9Y4H4 160 aa8.88□□□□□ -0.99
HPS4-209ENST00000466781 SF3B1O75533 1304 aaKnown RBP eCLIP8.88□□□□□ -0.991e-7■■■■■ 66.8
HPS4-209ENST00000466781 CCDC154A6NI56 674 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 WWP2O00308 870 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 INSRRP14616 1297 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TLX1P31314 330 aaPredicted RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 MYL6P60660 151 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 COPZ1P61923 177 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 GRIK5Q16478 980 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PRAMEF19Q5SWL8 479 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 FOXR1Q6PIV2 292 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 BTN2A1Q7KYR7 527 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 RNF44Q7L0R7 432 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 RTL3Q8N8U3 475 aaKnown RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 OR56A4Q8NGH8 313 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ATP8B4Q8TF62 1192 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 QRFPRQ96P65 431 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ZIM3Q96PE6 472 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 RIOX1Q9H6W3 641 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 NMRAL1Q9HBL8 299 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 SEC22BO75396 215 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 MICAL2O94851 1124 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ATG7O95352 703 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PLEKP08567 350 aaPredicted RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 CRY2Q49AN0 593 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 SPANXN3Q5MJ09 141 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TRIQKQ629K1 86 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 C11orf63Q6NUN7 778 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TAF2Q6P1X5 1199 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 SLC27A1Q6PCB7 646 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 MFSD7Q6UXD7 560 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 RMND5BQ96G75 393 aaPredicted RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 RNPEPQ9H4A4 650 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 IL17RBQ9NRM6 502 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ANKDD1BA6NHY2 528 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 SMNDC1O75940 238 aaKnown RBP eCLIP8.87□□□□□ -0.99
HPS4-209ENST00000466781 LTFP02788 710 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 HMGCRP04035 888 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 MYL12AP19105 171 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 NPY2RP49146 381 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TMED10P49755 219 aaKnown RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 FXR1P51114 621 aaKnown RBP eCLIP8.87□□□□□ -0.99
HPS4-209ENST00000466781 SLC44A4Q53GD3 710 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 MIIPQ5JXC2 388 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PEG10Q86TG7 708 aaKnown RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 CERS5Q8N5B7 392 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 FNDC5Q8NAU1 212 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 REPS2Q8NFH8 660 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PROX1Q92786 737 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 POLR1BQ9H9Y6 1135 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 A1CFQ9NQ94 594 aaKnown RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 HEY2Q9UBP5 337 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ANKRD6Q9Y2G4 727 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TSC22D4Q9Y3Q8 395 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 C1QTNF3-AMACRE9PGA6 284 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 RGS14O43566 566 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ZBTB48P10074 688 aaPredicted RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 PRKAR2AP13861 404 aaKnown RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 CPA3P15088 417 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 GRK2P25098 689 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 SERPINA4P29622 427 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 CTNNB1P35222 781 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 RAD23AP54725 363 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 CDH17Q12864 832 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TPGS1Q6ZTW0 290 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 NIPA1Q7RTP0 329 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 MILR1Q7Z6M3 343 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ATG4AQ8WYN0 398 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ANKS1AQ92625 1134 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 CXorf40BQ96DE9 158 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PNMA5Q96PV4 448 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 UBDO15205 165 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 VPS4BO75351 444 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 CRABP2P29373 138 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 ZNF410Q86VK4 478 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PAFAH2Q99487 392 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 TBCDQ9BTW9 1192 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PRKD2Q9BZL6 878 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 PDGFDQ9GZP0 370 aaPredicted RBP8.87□□□□□ -0.99
HPS4-209ENST00000466781 TAS2R13Q9NYV9 303 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 SLC9A8Q9Y2E8 581 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 UMODL1Q5DID0 1318 aa8.87□□□□□ -0.99
HPS4-209ENST00000466781 CCT8L1PA6NM43 557 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 BIRC5O15392 142 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 PARNO95453 639 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 RRM1P23921 792 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ACAT1P24752 427 aaKnown RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 PIK3CGP48736 1102 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 HNMTP50135 292 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 IRX1P78414 480 aaPredicted RBP8.86□□□□□ -0.99
HPS4-209ENST00000466781 MGAT5Q09328 741 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 ADRM1Q16186 407 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 CCDC153Q494R4 210 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 FAM220AQ7Z4H9 259 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 DDHD1Q8NEL9 900 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 APBB2Q92870 758 aa8.86□□□□□ -0.99
HPS4-209ENST00000466781 KIFC1Q9BW19 673 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms