RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TBC1D14Q9P2M4 693 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 CCL26Q9Y258 94 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 SNX24Q9Y343 169 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 HELZP42694 1942 aaKnown RBP12.45□□□□□ -0.42
VPS16-206ENST00000466415 DENND4CQ5VZ89 1909 aa12.45□□□□□ -0.42
VPS16-206ENST00000466415 RASA4BC9J798 803 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 H0Y626 953 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 SLC9A3R1O14745 358 aaPredicted RBP12.44□□□□□ -0.42
VPS16-206ENST00000466415 RASA4O43374 803 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 GREM1O60565 184 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 TBX10O75333 385 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 ETS1P14921 441 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 VAV1P15498 845 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 WEE1P30291 646 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 GDF10P55107 478 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 YBEYP58557 167 aaPredicted RBP12.44□□□□□ -0.42
VPS16-206ENST00000466415 GPS1Q13098 491 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 CDH18Q13634 790 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 POLD3Q15054 466 aaPredicted RBP12.44□□□□□ -0.42
VPS16-206ENST00000466415 BRD3Q15059 726 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 P3H1Q32P28 736 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 PARP15Q460N3 678 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 DUPD1Q68J44 220 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 C4orf22Q6V702 233 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 ARHGEF18Q6ZSZ5 1173 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 LRRC49Q8IUZ0 686 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 ARHGAP12Q8IWW6 846 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 FAM217AQ8IXS0 508 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 UMODL1-AS1Q8N2C9 162 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 CARNMT1Q8N4J0 409 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 DDI1Q8WTU0 396 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 LRRN4Q8WUT4 740 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 DEPDC1BQ8WUY9 529 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 NSMCE1Q8WV22 266 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 FGF13Q92913 245 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 TMA16Q96EY4 203 aaKnown RBP12.44□□□□□ -0.42
VPS16-206ENST00000466415 MYEOVQ96EZ4 313 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 ZSWIM3Q96MP5 696 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 SP110Q9HB58 689 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 NDFIP2Q9NV92 336 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 GDE1Q9NZC3 331 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 KLHL8Q9P2G9 620 aaPredicted RBP12.44□□□□□ -0.42
VPS16-206ENST00000466415 RAB21Q9UL25 225 aa12.44□□□□□ -0.42
VPS16-206ENST00000466415 RNF103O00237 685 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 LUC7L3O95232 432 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 ZSCAN5DPP0CG00 497 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 POU3F3P20264 500 aaPredicted RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 CCNCP24863 283 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 ETFBP38117 255 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 IFNAR2P48551 515 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 PAPOLAP51003 745 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 SGSHP51688 502 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 ZNF33AQ06730 810 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 ADGRE1Q14246 886 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 KCTD19Q17RG1 926 aaPredicted RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 ANO4Q32M45 955 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 IZUMO3Q5VZ72 239 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 AFMIDQ63HM1 303 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 TPGS1Q6ZTW0 290 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 PCGF5Q86SE9 256 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 PRUNE1Q86TP1 453 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 SETD3Q86TU7 594 aaPredicted RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 MFN1Q8IWA4 741 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 TP53INP2Q8IXH6 220 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 GSPT2Q8IYD1 628 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 SMARCD2Q92925 531 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 BHMTQ93088 406 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 OTUB2Q96DC9 234 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 HMCESQ96FZ2 354 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 P2RY11Q96G91 374 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 FAM129AQ9BZQ8 928 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 KLC2Q9H0B6 622 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 MUC3BQ9H195 1237 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 WHRNQ9P202 907 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 MTRF1LQ9UGC7 380 aaKnown RBP12.43□□□□□ -0.42
VPS16-206ENST00000466415 CDH22Q9UJ99 828 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 CDH7Q9ULB5 785 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 CEP290O15078 2479 aa12.43□□□□□ -0.42
VPS16-206ENST00000466415 A0A0A0MRY4 1105 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 CCDC151A5D8V7 595 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 C5orf60A6NFR6 353 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
VPS16-206ENST00000466415 DNALI1O14645 258 aaPredicted RBP12.42□□□□□ -0.42
VPS16-206ENST00000466415 OPHN1O60890 802 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 ITIH2P19823 946 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 RPL22P35268 128 aaKnown RBP12.42□□□□□ -0.42
VPS16-206ENST00000466415 CARSP49589 748 aaKnown RBP12.42□□□□□ -0.42
VPS16-206ENST00000466415 CLCN6P51797 869 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 DRG2P55039 364 aaKnown RBP12.42□□□□□ -0.42
VPS16-206ENST00000466415 GNA12Q03113 381 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 CAV1Q03135 178 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
VPS16-206ENST00000466415 FAM78AQ5JUQ0 283 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms