RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PLEKHG6Q3KR16 790 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 PLK5Q496M5 336 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 ALFQ53S48 1182 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 FIGNQ5HY92 759 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 LAIR1Q6GTX8 287 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 LRRC31Q6UY01 552 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 TMEFF1Q8IYR6 380 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 CCDC185Q8N715 623 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 OR52K2Q8NGK3 314 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 NT5C3BQ969T7 300 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 PGAP3Q96FM1 320 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 SYT11Q9BT88 431 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 MAGEB5Q9BZ81 275 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 MUC3BQ9H195 1237 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 DUSP15Q9H1R2 295 aaPredicted RBP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 PRDM16Q9HAZ2 1276 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 AIPL1Q9NZN9 384 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 CNOT8Q9UFF9 292 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 LUC7L2Q9Y383 392 aaKnown RBP10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 VPS13AQ96RL7 3174 aa10.03□□□□□ -0.8
RTFDC1-205ENST00000466260 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 A0A1W2PQJ5 194 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 SIGLEC16A6NMB1 481 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 BNIP3LO60238 219 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 FTLP02792 175 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 DLDP09622 509 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ACADMP11310 421 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 DESP17661 470 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 PSMA2P25787 234 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 P2RY2P41231 377 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 HDAC4P56524 1084 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 GSCP56915 257 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ZBED6P86452 979 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 OGDHQ02218 1023 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 RPL6Q02878 288 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ZNF177Q13360 481 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ARL13BQ3SXY8 428 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 TTC39BQ5VTQ0 682 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 HGSNATQ68CP4 663 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 CXorf57Q6NSI4 855 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 RWDD4Q6NW29 188 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 STRADAQ7RTN6 431 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 FAM124AQ86V42 546 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 TMPRSS6Q8IU80 811 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 MYRIPQ8NFW9 859 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 PRCCQ92733 491 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 LMLNQ96KR4 655 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 MRGPRX1Q96LB2 322 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 IRX2Q9BZI1 471 aaPredicted RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 EDEM3Q9BZQ6 932 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 MKRN2Q9H000 416 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 PARD6AQ9NPB6 346 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ADAMTS1Q9UHI8 967 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 SLC25A13Q9UJS0 675 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 VPS28Q9UK41 221 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 CAPN11Q9UMQ6 739 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 ERVW-1Q9UQF0 538 aa10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.02□□□□□ -0.817e-8■□□□□ 9.4
RTFDC1-205ENST00000466260 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.02□□□□□ -0.81
RTFDC1-205ENST00000466260 NUMA1Q14980 2115 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 IGHV1OR15-9A0A0B4J2B8 117 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 TCRBV5S1A1TA0A578 114 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 TTC34A8MYJ7 566 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 NPC1O15118 1278 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 TIMM44O43615 452 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 SIN3BO75182 1162 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 RTN2O75298 545 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 RHOBTB1O94844 696 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 EPN2O95208 641 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 ASLP04424 464 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 SERPING1P05155 500 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 RETP07949 1114 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 PTPN9P43378 593 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 COPAP53621 1224 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 CDH4P55283 916 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 ECT2LQ008S8 904 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 MTA1Q13330 715 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 E2F5Q15329 346 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 MAP7D1Q3KQU3 841 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 ACCSLQ4AC99 568 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 DAB2IPQ5VWQ8 1189 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 PMS2CLQ68D20 193 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 RNF43Q68DV7 783 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 ARCQ7LC44 396 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 TMC6Q7Z403 805 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 BNIPLQ7Z465 357 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 KIAA0907Q7Z7F0 614 aaPredicted RBP10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 VPS36Q86VN1 386 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 ZNF354CQ86Y25 554 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 PYROXD2Q8N2H3 581 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 OR7D4Q8NG98 312 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 MARVELD3Q96A59 401 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 SIPA1Q96FS4 1042 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 MRGPRX3Q96LB0 322 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 TRIM7Q9C029 511 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 ZYG11BQ9C0D3 744 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 DEF6Q9H4E7 631 aa10.01□□□□□ -0.81
RTFDC1-205ENST00000466260 CD248Q9HCU0 757 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms