RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PRPSAP2O60256 369 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 NDUFA10O95299 355 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 ASLP04424 464 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 ATP5BP06576 529 aaKnown RBP20.89■□□□□ 0.93
SKA3-205ENST00000465471 HOXB2P14652 356 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 RHOQP17081 205 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 POLR2EP19388 210 aaKnown RBP20.89■□□□□ 0.93
SKA3-205ENST00000465471 IL1R2P27930 398 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 HTR7P34969 479 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 NRLP54845 237 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 SLC25A11Q02978 314 aaKnown RBP20.89■□□□□ 0.93
SKA3-205ENST00000465471 CA9Q16790 459 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 RAD9BQ6WBX8 426 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 TFAP2DQ7Z6R9 452 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 RHOT2Q8IXI1 618 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 KDM1BQ8NB78 822 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 SLC35G2Q8TBE7 412 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 CYB5D2Q8WUJ1 264 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 MRGPRX3Q96LB0 322 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 BAG1Q99933 345 aaPredicted RBP20.89■□□□□ 0.93
SKA3-205ENST00000465471 FEM1AQ9BSK4 669 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 GRPEL1Q9HAV7 217 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 TMEM248Q9NWD8 314 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 GPATCH2LQ9NWQ4 482 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 ZSCAN32Q9NX65 697 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 PCDHGA2Q9Y5H1 932 aa20.89■□□□□ 0.93
SKA3-205ENST00000465471 EPN1Q9Y6I3 576 aaPredicted RBP20.89■□□□□ 0.93
SKA3-205ENST00000465471 WASH3PC4AMC7 463 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 LILRB5O75023 590 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 PROSCO94903 275 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 MOCS3O95396 460 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 APBB3O95704 486 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 MAN1A1P33908 653 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 WASP42768 502 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 MAGEA1P43355 309 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 C6orf118Q5T5N4 469 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 ZNF783Q6ZMS7 281 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 WDR5BQ86VZ2 330 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 TSTD1Q8NFU3 115 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 EPAS1Q99814 870 aa20.88■□□□□ 0.93
SKA3-205ENST00000465471 ILVBLA1L0T0 632 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 WASH4PA8MWX3 477 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 RHOCP08134 193 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 SRPRAP08240 638 aaKnown RBP20.87■□□□□ 0.93
SKA3-205ENST00000465471 PRKCHP24723 683 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 OR1E1P30953 314 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 NBL1P41271 181 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 CTSOP43234 321 aaPredicted RBP20.87■□□□□ 0.93
SKA3-205ENST00000465471 MAPKAPK2P49137 400 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 VASPP50552 380 aaPredicted RBP20.87■□□□□ 0.93
SKA3-205ENST00000465471 NHLH1Q02575 133 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 DPYSL2Q16555 572 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 RNF219Q5W0B1 726 aaPredicted RBP20.87■□□□□ 0.93
SKA3-205ENST00000465471 SDE2Q6IQ49 451 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 KIAA1211LQ6NV74 962 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 LONP2Q86WA8 852 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 TEKT4Q8WW24 435 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 PPP1R9BQ96SB3 815 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 KCTD15Q96SI1 283 aaPredicted RBP20.87■□□□□ 0.93
SKA3-205ENST00000465471 PSMB7Q99436 277 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 NDFIP2Q9NV92 336 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 PLA2G4CQ9UP65 541 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 ERVW-1Q9UQF0 538 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 REXO2Q9Y3B8 237 aaKnown RBP20.87■□□□□ 0.93
SKA3-205ENST00000465471 PCDHA13Q9Y5I0 950 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 VPS13AQ96RL7 3174 aa20.87■□□□□ 0.93
SKA3-205ENST00000465471 NYNRINQ9P2P1 1898 aaKnown RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 GOLGA6L3A6NEY3 463 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 C7P10643 843 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 FNTBP49356 437 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 ZNF135P52742 658 aaPredicted RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 HADHBP55084 474 aaKnown RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 GSDMDP57764 484 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 ECT2LQ008S8 904 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 SULT2A1Q06520 285 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 SPA17Q15506 151 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 BOLA3Q53S33 107 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 TXNRD3NBQ6F5E7 133 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 RWDD4Q6NW29 188 aaKnown RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 SERPINA13PQ6UXR4 307 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 CPNE8Q86YQ8 564 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 RTL3Q8N8U3 475 aaKnown RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 DCAF4L2Q8NA75 395 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 MDGA1Q8NFP4 955 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 ATOH1Q92858 354 aaPredicted RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 DHX35Q9H5Z1 703 aaKnown RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 POLMQ9NP87 494 aaPredicted RBP20.86■□□□□ 0.93
SKA3-205ENST00000465471 RAD54BQ9Y620 910 aa20.86■□□□□ 0.93
SKA3-205ENST00000465471 PLXND1Q9Y4D7 1925 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 A0A0D9SEW6 157 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 TCRBV21S2A2A0A5A6 115 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 GOLGA6L6A8MZA4 724 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 FGF10O15520 208 aaPredicted RBP20.85■□□□□ 0.93
SKA3-205ENST00000465471 CREB3O43889 395 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 RARAP10276 462 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 EPHB2P29323 1055 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 ARHGAP25P42331 645 aa20.85■□□□□ 0.93
SKA3-205ENST00000465471 FNDC3BQ53EP0 1204 aaKnown RBP20.85■□□□□ 0.93
SKA3-205ENST00000465471 ZC3H14Q6PJT7 736 aaKnown RBP20.85■□□□□ 0.93
SKA3-205ENST00000465471 MUC3BQ9H195 1237 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms