RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 UBE4BO95155 1302 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 EDDM13A0A1B0GTR0 161 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 BLACEA4D250 179 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 GJB6O95452 261 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 BMP15O95972 392 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 ADH1BP00325 375 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 GP1BAP07359 652 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 P4HA1P13674 534 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 CASP1P29466 404 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 DUSP3P51452 185 aaPredicted RBP15.49■□□□□ 0.07
HDAC6-214ENST00000465269 PDX1P52945 283 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 CEBPZQ03701 1054 aaKnown RBP15.49■□□□□ 0.07
HDAC6-214ENST00000465269 INCA1Q0VD86 236 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 SGSM1Q2NKQ1 1148 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 FAM133BQ5BKY9 247 aaKnown RBP15.49■□□□□ 0.07
HDAC6-214ENST00000465269 PITRM1Q5JRX3 1037 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 PERM1Q5SV97 790 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 FAM173BQ6P4H8 233 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 SLC22A18ASQ8N1D0 253 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 CFAP52Q8N1V2 620 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 PSMG3-AS1Q96PY0 264 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 NLGN3Q9NZ94 848 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 SEPT3Q9UH03 358 aa15.49■□□□□ 0.07
HDAC6-214ENST00000465269 CRYBG3Q68DQ2 2970 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 CELSR2Q9HCU4 2923 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-214ENST00000465269 EIF3DO15371 548 aaKnown RBP eCLIP15.48■□□□□ 0.07
HDAC6-214ENST00000465269 MAGEC1O60732 1142 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 ASS1P00966 412 aaKnown RBP15.48■□□□□ 0.07
HDAC6-214ENST00000465269 HLA-DRAP01903 254 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 HGFP14210 728 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 TKTL1P51854 596 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 ASIC1P78348 528 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 CNTN1Q12860 1018 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 OVGP1Q12889 678 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 ZNF177Q13360 481 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-214ENST00000465269 FAM26FQ5R3K3 315 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 NADSYN1Q6IA69 706 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 OR6B2Q6IFH4 312 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 RBM44Q6ZP01 1051 aaKnown RBP15.48■□□□□ 0.07
HDAC6-214ENST00000465269 CCDC73Q6ZRK6 1079 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 APCDD1Q8J025 514 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 ARL14Q8N4G2 192 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 HTR3CQ8WXA8 447 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 SYNDIG1Q9H7V2 258 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 DMTF1Q9Y222 760 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 CEP83Q9Y592 693 aa15.48■□□□□ 0.07
HDAC6-214ENST00000465269 SRPRBQ9Y5M8 271 aaKnown RBP15.48■□□□□ 0.07
HDAC6-214ENST00000465269 TARSL2A2RTX5 802 aaKnown RBP15.47■□□□□ 0.07
HDAC6-214ENST00000465269 CLEC18AA5D8T8 446 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 PRAMEF26H0Y7S4 382 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 PLRG1O43660 514 aaKnown RBP15.47■□□□□ 0.07
HDAC6-214ENST00000465269 LZTS3O60299 673 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-214ENST00000465269 ZBED1O96006 694 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 ALPPL2P10696 532 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 SLC5A2P31639 672 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 TXLNAP40222 546 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 PIK3CAP42336 1068 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 CLDN10P78369 228 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 ZACNQ401N2 412 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 RAB41Q5JT25 222 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 AGBL4Q5VU57 503 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 CLEC18BQ6UXF7 455 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 SV2AQ7L0J3 742 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 JAMLQ86YT9 394 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 ARHGAP18Q8N392 663 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 TMEM145Q8NBT3 493 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 CLEC18CQ8NCF0 446 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 WDR36Q8NI36 951 aaKnown RBP15.47■□□□□ 0.07
HDAC6-214ENST00000465269 FIBINQ8TAL6 211 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 DNAJC28Q9NX36 388 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 HBS1LQ9Y450 684 aaKnown RBP15.47■□□□□ 0.07
HDAC6-214ENST00000465269 FBN2P35556 2912 aa15.47■□□□□ 0.07
HDAC6-214ENST00000465269 YJEFN3A6XGL0 299 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 E7ENQ6 273 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 SCAMP1O15126 338 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 RNGTTO60942 597 aaKnown RBP15.46■□□□□ 0.07
HDAC6-214ENST00000465269 ASLP04424 464 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 ITGB2P05107 769 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 TAS2R38P59533 333 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 ARID5BQ14865 1188 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 DEFB133Q30KQ1 61 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 SETMARQ53H47 684 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-214ENST00000465269 C1orf220Q5T0J3 134 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 B3GNT8Q7Z7M8 397 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 TRIM69Q86WT6 500 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 RNF139Q8WU17 664 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 TATDN2Q93075 761 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 HEXIM2Q96MH2 286 aaKnown RBP15.46■□□□□ 0.07
HDAC6-214ENST00000465269 IGSF5Q9NSI5 407 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 PCDHGA4Q9Y5G9 962 aa15.46■□□□□ 0.07
HDAC6-214ENST00000465269 ITIH6Q6UXX5 1313 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 A0A1W2PQU0 124 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 MUSKO15146 869 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 PPFIA2O75334 1257 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 ITGA2BP08514 1039 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 ZNF445P59923 1031 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 FOXK1P85037 733 aa15.45■□□□□ 0.06
HDAC6-214ENST00000465269 ECT2LQ008S8 904 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms