RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TCF7P36402 384 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 NUP107P57740 925 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 MS4A2Q01362 244 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SP2Q02086 613 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 ORC1Q13415 861 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 PPP2R5DQ14738 602 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 MGAT5BQ3V5L5 792 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SH3D19Q5HYK7 790 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 FAM182AQ5T1J6 154 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SEL1L3Q68CR1 1132 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 DUS1LQ6P1R4 473 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 KLHL35Q6PF15 583 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 OLFML1Q6UWY5 402 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 NAPRTQ6XQN6 538 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 Q6ZNX1 250 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 LPCAT2Q7L5N7 544 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 DCLK2Q8N568 766 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 C1orf127Q8N9H9 656 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 UBA3Q8TBC4 463 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 PRPF31Q8WWY3 499 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 HTR3CQ8WXA8 447 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 CERS2Q96G23 380 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 DUS3LQ96G46 650 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 PIWIL1Q96J94 861 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 KLHL32Q96NJ5 620 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SLC4A5Q9BY07 1137 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 OXCT2Q9BYC2 517 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 IL22Q9GZX6 179 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 EFCAB1Q9HAE3 211 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 NGRNQ9NPE2 291 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 MAN1C1Q9NR34 630 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 PNPLA3Q9NST1 481 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 UTP6Q9NYH9 597 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 EPS15L1Q9UBC2 864 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SUCOQ9UBS9 1254 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 RNF11Q9Y3C5 154 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 LOC285556D6RIA3 1793 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 FER1L6Q2WGJ9 1857 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 LTBP4Q8N2S1 1624 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 GOLGA8QA0A0J9YX86 632 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 MYOCOSA0A1B0GUC4 107 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SH3PXD2BA1X283 911 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 GOLGA8OA6NCC3 632 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 TRIM64CA6NLI5 447 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 FAM155AB1AL88 458 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 GOLGA8NF8WBI6 632 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 H0YIN7 160 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 H3BNH8 94 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 RNASEH2AO75792 299 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 ZNF189O75820 626 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 MAP3K6O95382 1288 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 POLBP06746 335 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 HNRNPCP07910 306 aaKnown RBP eCLIP7.45□□□□□ -1.22
USP48-206ENST00000464577 PFKMP08237 780 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 MMP10P09238 476 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 PTPN9P43378 593 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 CD97P48960 835 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 RPL14P50914 215 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 COG7P83436 770 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SLC6A3Q01959 620 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 NSUN2Q08J23 767 aaKnown RBP eCLIP7.45□□□□□ -1.22
USP48-206ENST00000464577 PRKAA1Q13131 559 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 TMED1Q13445 227 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 ART3Q13508 389 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 MXD4Q14582 209 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 LSM12Q3MHD2 195 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 PPM1LQ5SGD2 360 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 FAM160B1Q5W0V3 765 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SNRNP48Q6IEG0 339 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 GALNT4Q8N4A0 578 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 TRIML2Q8N7C3 387 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 CXorf38Q8TB03 319 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 ABTB1Q969K4 478 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 ASB9Q96DX5 294 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 FAM167AQ96KS9 214 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 HEXIM2Q96MH2 286 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 PHF12Q96QT6 1004 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 UHRF1Q96T88 793 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 PCYT2Q99447 389 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 GATA5Q9BWX5 397 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 NUF2Q9BZD4 464 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 DRC3Q9H069 523 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 RPF1Q9H9Y2 349 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 ZBTB26Q9HCK0 441 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 VPS45Q9NRW7 570 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 ZNF358Q9NW07 568 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 OXSMQ9NWU1 459 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SYBUQ9NX95 663 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 TUBA8Q9NY65 449 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 RCOR3Q9P2K3 495 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 HESX1Q9UBX0 185 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 IPO11Q9UI26 975 aaKnown RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 PACSIN3Q9UKS6 424 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 BARX2Q9UMQ3 279 aaPredicted RBP7.45□□□□□ -1.22
USP48-206ENST00000464577 MYRFQ9Y2G1 1151 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 SH3GLB1Q9Y371 365 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 PCDHGA4Q9Y5G9 962 aa7.45□□□□□ -1.22
USP48-206ENST00000464577 A0A096LPK6 155 aa7.44□□□□□ -1.22
USP48-206ENST00000464577 ARHGEF37A1IGU5 675 aa7.44□□□□□ -1.22
USP48-206ENST00000464577 ACKR2O00590 384 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms