RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TCP11X2Q5H9J9 407 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 KIAA0895LQ68EN5 471 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 CXorf57Q6NSI4 855 aaKnown RBP19.43■□□□□ 0.7
SF3A1-205ENST00000463818 UNQ6494/PRO21346Q6UXR6 183 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 PPP1R9BQ96SB3 815 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 NPY6RQ99463 290 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 OMDQ99983 421 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 NAA15Q9BXJ9 866 aaKnown RBP19.43■□□□□ 0.7
SF3A1-205ENST00000463818 ADAM33Q9BZ11 813 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 SIK2Q9H0K1 926 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 TM7SF3Q9NS93 570 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 RRN3Q9NYV6 651 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.43■□□□□ 0.7
SF3A1-205ENST00000463818 VANGL2Q9ULK5 521 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 ANKRD6Q9Y2G4 727 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 CEP295Q9C0D2 2601 aa19.43■□□□□ 0.7
SF3A1-205ENST00000463818 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.42■□□□□ 0.7
SF3A1-205ENST00000463818 FAM170AA1A519 330 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 RNASEH2AO75792 299 aaKnown RBP19.42■□□□□ 0.7
SF3A1-205ENST00000463818 TRIM16O95361 564 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 ZNF883P0CG24 379 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 UCHL3P15374 230 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 CDH5P33151 784 aaPredicted RBP19.42■□□□□ 0.7
SF3A1-205ENST00000463818 GGCXP38435 758 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 GABRB2P47870 512 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 IRAK1P51617 712 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 CENPCQ03188 943 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 ZNF177Q13360 481 aaPredicted RBP19.42■□□□□ 0.7
SF3A1-205ENST00000463818 TAF3Q5VWG9 929 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 NCEH1Q6PIU2 408 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 ERICH1Q86X53 443 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 CHCHD4Q8N4Q1 142 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 SETD7Q8WTS6 366 aaKnown RBP19.42■□□□□ 0.7
SF3A1-205ENST00000463818 C18orf8Q96DM3 657 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 ALG14Q96F25 216 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 ORAI3Q9BRQ5 295 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 STK33Q9BYT3 514 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 WDCPQ9H6R7 721 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 PIGVQ9NUD9 493 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 TAB2Q9NYJ8 693 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 FNDC3AQ9Y2H6 1198 aaKnown RBP19.42■□□□□ 0.7
SF3A1-205ENST00000463818 SNX11Q9Y5W9 270 aa19.42■□□□□ 0.7
SF3A1-205ENST00000463818 KCNK3O14649 394 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 CBFA2T3O75081 653 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 ADCY5O95622 1261 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 IGHV4-34P06331 123 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 VAV1P15498 845 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 TFE3P19532 575 aaPredicted RBP19.41■□□□□ 0.7
SF3A1-205ENST00000463818 EEF1GP26641 437 aaKnown RBP19.41■□□□□ 0.7
SF3A1-205ENST00000463818 GRIA4P48058 902 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 PSMD8P48556 350 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 CXCR3P49682 368 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 ZNF423Q2M1K9 1284 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 OTUD1Q5VV17 481 aaPredicted RBP19.41■□□□□ 0.7
SF3A1-205ENST00000463818 OR52K2Q8NGK3 314 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 FRS2Q8WU20 508 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 FEM1AQ9BSK4 669 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 TMEM121BQ9BXQ6 578 aaPredicted RBP19.41■□□□□ 0.7
SF3A1-205ENST00000463818 TKTL2Q9H0I9 626 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 ADAMTS1Q9UHI8 967 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 KLK13Q9UKR3 277 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 STAP1Q9ULZ2 295 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 MUC22E2RYF6 1773 aaPredicted RBP19.41■□□□□ 0.7
SF3A1-205ENST00000463818 KNL1Q8NG31 2342 aa19.41■□□□□ 0.7
SF3A1-205ENST00000463818 LRRC72A6NJI9 287 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 CLDN11O75508 207 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 IL1BP01584 269 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 GOT1P17174 413 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 C5AR1P21730 350 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 SULT1E1P49888 294 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 C5orf22Q49AR2 442 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 FAM102AQ5T9C2 384 aaPredicted RBP19.4■□□□□ 0.7
SF3A1-205ENST00000463818 LRSAM1Q6UWE0 723 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 LAYNQ6UX15 382 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 DBX2Q6ZNG2 339 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 SND1Q7KZF4 910 aaKnown RBP eCLIP19.4■□□□□ 0.7
SF3A1-205ENST00000463818 NOP9Q86U38 636 aaKnown RBP19.4■□□□□ 0.7
SF3A1-205ENST00000463818 AADATQ8N5Z0 425 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 OR2T34Q8NGX1 318 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 ENOX1Q8TC92 643 aaKnown RBP19.4■□□□□ 0.7
SF3A1-205ENST00000463818 NT5C3BQ969T7 300 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 VPS16Q9H269 839 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 EBF2Q9HAK2 575 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 ANLNQ9NQW6 1124 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 ARHGEF38Q9NXL2 777 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 PCOLCE2Q9UKZ9 415 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 FZD4Q9ULV1 537 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 MSRB2Q9Y3D2 182 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 NEUROG3Q9Y4Z2 214 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 PCDHGB2Q9Y5G2 931 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 OR51B4Q9Y5P0 310 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 SNX10Q9Y5X0 201 aa19.4■□□□□ 0.7
SF3A1-205ENST00000463818 A0A1W2PPC4 97 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 CNTN5O94779 1100 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 ADH1BP00325 375 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 F9P00740 461 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 SCNN1AP37088 669 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 VASPP50552 380 aaPredicted RBP19.39■□□□□ 0.69
SF3A1-205ENST00000463818 CDH4P55283 916 aa19.39■□□□□ 0.69
SF3A1-205ENST00000463818 RACK1P63244 317 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms