RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 MAP7D3Q8IWC1 876 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 SFTPA1Q8IWL2 248 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 PYROXD2Q8N2H3 581 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 IL17RCQ8NAC3 791 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 TXNDC5Q8NBS9 432 aaKnown RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 TTC17Q96AE7 1141 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 C2orf49Q9BVC5 232 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 TSGA10Q9BZW7 698 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 POLMQ9NP87 494 aaPredicted RBP20.34■□□□□ 0.85
COL9A3-204ENST00000463487 VPS28Q9UK41 221 aa20.34■□□□□ 0.85
COL9A3-204ENST00000463487 ILVBLA1L0T0 632 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 SPOPO43791 374 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 RARAP10276 462 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 GJC1P36383 396 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 HCAR3P49019 387 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 IRAK1P51617 712 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 DGKEP52429 567 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 NRLP54845 237 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 SEMA3BQ13214 749 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 GAS6Q14393 721 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 STARD3Q14849 445 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 DPYSL2Q16555 572 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 FNDC3BQ53EP0 1204 aaKnown RBP20.33■□□□□ 0.85
COL9A3-204ENST00000463487 KCNT1Q5JUK3 1230 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 EMC10Q5UCC4 262 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 DAB2IPQ5VWQ8 1189 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 SERPINA13PQ6UXR4 307 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 POLNQ7Z5Q5 900 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 CCDC33Q8N5R6 958 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 CAMKK1Q8N5S9 505 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 RTL3Q8N8U3 475 aaKnown RBP20.33■□□□□ 0.85
COL9A3-204ENST00000463487 LMLNQ96KR4 655 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 FEM1AQ9BSK4 669 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 PRMT8Q9NR22 394 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-204ENST00000463487 THAP10Q9P2Z0 257 aaPredicted RBP20.33■□□□□ 0.85
COL9A3-204ENST00000463487 SLC25A13Q9UJS0 675 aa20.33■□□□□ 0.85
COL9A3-204ENST00000463487 PJA2O43164 708 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 ALDH1A2O94788 518 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 SRPRAP08240 638 aaKnown RBP20.32■□□□□ 0.84
COL9A3-204ENST00000463487 HOXB2P14652 356 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 IL1R2P27930 398 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 ECT2LQ008S8 904 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 ANGPT1Q15389 498 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 TMEM215Q68D42 235 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 C11orf63Q6NUN7 778 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 RFX8Q6ZV50 586 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 CYP4V2Q6ZWL3 525 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-204ENST00000463487 KDM1BQ8NB78 822 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 DESI2Q9BSY9 194 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 FAM126AQ9BYI3 521 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-204ENST00000463487 RCOR3Q9P2K3 495 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-204ENST00000463487 HPCAL4Q9UM19 191 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 REXO2Q9Y3B8 237 aaKnown RBP20.32■□□□□ 0.84
COL9A3-204ENST00000463487 STON1Q9Y6Q2 735 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 DOCK4Q8N1I0 1966 aa20.32■□□□□ 0.84
COL9A3-204ENST00000463487 WASH4PA8MWX3 477 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 SYNCRIPO60506 623 aaKnown RBP20.31■□□□□ 0.84
COL9A3-204ENST00000463487 RAMP2O60895 175 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 CCDC175P0C221 793 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 SATB1Q01826 763 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 GNA12Q03113 381 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 ZNF234Q14588 700 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 PDK2Q15119 407 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 ZNF528Q3MIS6 628 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 LRRC38Q5VT99 294 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 PKN3Q6P5Z2 889 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 DAAM2Q86T65 1068 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 NLRP14Q86W24 1093 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 RHOT1Q8IXI2 618 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 DCAF4L2Q8NA75 395 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 TSTD1Q8NFU3 115 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 KCTD15Q96SI1 283 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-204ENST00000463487 GABRG3Q99928 467 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 MAGEH1Q9H213 219 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 CACNA2D2Q9NY47 1150 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 DNAI1Q9UI46 699 aa20.31■□□□□ 0.84
COL9A3-204ENST00000463487 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.31■□□□□ 0.84
COL9A3-204ENST00000463487 ZNF318Q5VUA4 2279 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 SGK1O00141 431 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 KRT86O43790 486 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 BUB1BO60566 1050 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-204ENST00000463487 APBB3O95704 486 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 TCF4P15884 667 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 MZF1P28698 734 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-204ENST00000463487 PTPN5P54829 565 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 CDH6P55285 790 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 GEMIN4P57678 1058 aaKnown RBP20.3■□□□□ 0.84
COL9A3-204ENST00000463487 CSTF1Q05048 431 aaKnown RBP20.3■□□□□ 0.84
COL9A3-204ENST00000463487 CRY1Q16526 586 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 CA9Q16790 459 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 PARP15Q460N3 678 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 ZNF354CQ86Y25 554 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 APCDD1Q8J025 514 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 KCTD6Q8NC69 237 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 CYB5D2Q8WUJ1 264 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 SORCS1Q8WY21 1168 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 SPON2Q9BUD6 331 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 ATP13A1Q9HD20 1204 aa20.3■□□□□ 0.84
COL9A3-204ENST00000463487 DDX56Q9NY93 547 aaKnown RBP20.3■□□□□ 0.84
COL9A3-204ENST00000463487 INTS6Q9UL03 887 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms