RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 VPS28Q9UK41 221 aa18.51■□□□□ 0.55
LINC00960-201ENST00000463183 NCOR2Q9Y618 2525 aa18.51■□□□□ 0.55
LINC00960-201ENST00000463183 MUC22E2RYF6 1773 aaPredicted RBP18.51■□□□□ 0.55
LINC00960-201ENST00000463183 MED19A0JLT2 244 aaPredicted RBP18.5■□□□□ 0.55
LINC00960-201ENST00000463183 LRRC53A6NM62 1247 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 TMCO5BA8MYB1 307 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 BNIP3LO60238 219 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 RHOCP08134 193 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 CCDC172P0C7W6 258 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 KRT3P12035 628 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 OXTRP30559 389 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 NNMTP40261 264 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 ASIC2Q16515 512 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 HNRNPA1L2Q32P51 320 aaKnown RBP18.5■□□□□ 0.55
LINC00960-201ENST00000463183 ACCSLQ4AC99 568 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 SYCP2LQ5T4T6 812 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 SH3PXD2AQ5TCZ1 1133 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 ZNF776Q68DI1 518 aaPredicted RBP18.5■□□□□ 0.55
LINC00960-201ENST00000463183 LRSAM1Q6UWE0 723 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 METTL3Q86U44 580 aaKnown RBP18.5■□□□□ 0.55
LINC00960-201ENST00000463183 OR52K2Q8NGK3 314 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 CEP192Q8TEP8 1941 aa18.5■□□□□ 0.55
LINC00960-201ENST00000463183 RNASEH1O60930 286 aaKnown RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 CLDN11O75508 207 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 CALB1P05937 261 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 SRPRAP08240 638 aaKnown RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 VAV1P15498 845 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 TNFAIP3P21580 790 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 ATXN3P54252 364 aaPredicted RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 CDH4P55283 916 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 CCDC14Q49A88 953 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 TTC31Q49AM3 519 aaPredicted RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 DCAF12L1Q5VU92 463 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 DNAJC24Q6P3W2 148 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 MMAAQ8IVH4 418 aaKnown RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 FOXJ1Q92949 421 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 ZNF419Q96HQ0 510 aaPredicted RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 NUP58Q9BVL2 599 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 TMEM9BQ9NQ34 198 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 SLC25A13Q9UJS0 675 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 NUMA1Q14980 2115 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 A0A1B0GTH6 734 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 EDDM13A0A1B0GTR0 161 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 FAM47DPA6NHR8 397 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 E9PAM4 449 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 GOLGA6L19H0YKK7 550 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 ENGP17813 658 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 PTMSP20962 102 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 ACSL1P33121 698 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 DPP6P42658 865 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 PSMD8P48556 350 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 OXCT1P55809 520 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 PTP4A2Q12974 167 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 SLC12A1Q13621 1099 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 DUOXA1Q1HG43 343 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 PPM1JQ5JR12 505 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 WDR45BQ5MNZ6 344 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 PHF13Q86YI8 300 aaPredicted RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 STK40Q8N2I9 435 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 ZCCHC9Q8N567 271 aaKnown RBP18.49■□□□□ 0.55
LINC00960-201ENST00000463183 FAM172AQ8WUF8 416 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 BAP1Q92560 729 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 FEM1AQ9BSK4 669 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 FBRSQ9HAH7 460 aa18.49■□□□□ 0.55
LINC00960-201ENST00000463183 PI4KAP42356 2102 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 C2CD4BA6NLJ0 364 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 MID1O15344 667 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 GPD1P21695 349 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 RFC1P35251 1148 aaPredicted RBP18.48■□□□□ 0.55
LINC00960-201ENST00000463183 LIMK1P53667 647 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 GFPT1Q06210 699 aaPredicted RBP18.48■□□□□ 0.55
LINC00960-201ENST00000463183 SULT2A1Q06520 285 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 ARL13BQ3SXY8 428 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 C9orf64Q5T6V5 341 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 SFMBT2Q5VUG0 894 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 RWDD4Q6NW29 188 aaKnown RBP18.48■□□□□ 0.55
LINC00960-201ENST00000463183 MON1BQ7L1V2 547 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 IRF2BP2Q7Z5L9 587 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 DNAAF5Q86Y56 855 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 MCEEQ96PE7 176 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 PPP1R9BQ96SB3 815 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 SPON2Q9BUD6 331 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 BTBD1Q9H0C5 482 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 RSPH9Q9H1X1 276 aaPredicted RBP18.48■□□□□ 0.55
LINC00960-201ENST00000463183 C6orf106Q9H6K1 298 aaPredicted RBP18.48■□□□□ 0.55
LINC00960-201ENST00000463183 FBXL12Q9NXK8 326 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 TAS2R14Q9NYV8 317 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 EVLQ9UI08 416 aaPredicted RBP18.48■□□□□ 0.55
LINC00960-201ENST00000463183 SLC6A14Q9UN76 642 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 NCKAP1Q9Y2A7 1128 aa18.48■□□□□ 0.55
LINC00960-201ENST00000463183 TNRC6BQ9UPQ9 1833 aaKnown RBP18.47■□□□□ 0.55
LINC00960-201ENST00000463183 A0A1W2PP55 124 aa18.47■□□□□ 0.55
LINC00960-201ENST00000463183 SNAP91O60641 907 aa18.47■□□□□ 0.55
LINC00960-201ENST00000463183 RNASEH2AO75792 299 aaKnown RBP18.47■□□□□ 0.55
LINC00960-201ENST00000463183 FSBPO95073 299 aa18.47■□□□□ 0.55
LINC00960-201ENST00000463183 SEMA4FO95754 770 aa18.47■□□□□ 0.55
LINC00960-201ENST00000463183 IL1BP01584 269 aa18.47■□□□□ 0.55
LINC00960-201ENST00000463183 GNSP15586 552 aa18.47■□□□□ 0.55
LINC00960-201ENST00000463183 OR1E1P30953 314 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms