RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 SPATA17Q96L03 361 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 ADPGKQ9BRR6 497 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 ZNF768Q9H5H4 540 aaKnown RBP6.16□□□□□ -1.42
COPS3-205ENST00000463097 USP29Q9HBJ7 922 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 ABHD10Q9NUJ1 306 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 PEMTQ9UBM1 199 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 HDAC6Q9UBN7 1215 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 DKK3Q9UBP4 350 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 CCNL1Q9UK58 526 aaPredicted RBP6.16□□□□□ -1.42
COPS3-205ENST00000463097 ZNF536O15090 1300 aa6.16□□□□□ -1.42
COPS3-205ENST00000463097 CCNT1O60563 726 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 PRAMEF2O60811 474 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 DLDP09622 509 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 PKMP14618 531 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 OAS2P29728 719 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 HIBADHP31937 336 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 AGTR2P50052 363 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 TPTEP56180 551 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 PSMC6P62333 389 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 GOLGA8DPQ0D2H9 430 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 IL13RA2Q14627 380 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 SF3B3Q15393 1217 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 SLC18A3Q16572 532 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 BEAN1Q3B7T3 259 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 GXYLT1Q4G148 440 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 RAB41Q5JT25 222 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 DENND2CQ68D51 928 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 TMEM154Q6P9G4 183 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 GALNTL5Q7Z4T8 443 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 GALNT7Q86SF2 657 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 LAS2Q8IYD9 372 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 TOR1AIP2Q8NFQ8 470 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 SMARCE1Q969G3 411 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 FUBP1Q96AE4 644 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 PTCD3Q96EY7 689 aaKnown RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 FAM89AQ96GI7 184 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 SNX15Q9NRS6 342 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 SUCLA2Q9P2R7 463 aaPredicted RBP6.15□□□□□ -1.42
COPS3-205ENST00000463097 CDH22Q9UJ99 828 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 SLC25A13Q9UJS0 675 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 AMFRQ9UKV5 643 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 B3GNT3Q9Y2A9 372 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 ADAM18Q9Y3Q7 739 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 DUSP10Q9Y6W6 482 aa6.15□□□□□ -1.42
COPS3-205ENST00000463097 ADGRA2Q96PE1 1338 aa6.15□□□□□ -1.43
COPS3-205ENST00000463097 NPIPB6E9PJ23 425 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 FYB1O15117 783 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 ADAM20O43506 726 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 ENTPD3O75355 529 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 FARP2O94887 1054 aaPredicted RBP6.14□□□□□ -1.43
COPS3-205ENST00000463097 OR2C1O95371 312 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 COMTP21964 271 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 DDX6P26196 483 aaKnown RBP eCLIP6.14□□□□□ -1.43
COPS3-205ENST00000463097 CTGFP29279 349 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SLC8A1P32418 973 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 TTKP33981 857 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 GJC1P36383 396 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 DIO1P49895 249 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SLC37A1P57057 533 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 GPC5P78333 572 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 B4GALNT1Q00973 533 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 ABHD18Q0P651 414 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 CRHR2Q13324 411 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 RRP1BQ14684 758 aaKnown RBP6.14□□□□□ -1.43
COPS3-205ENST00000463097 RABL3Q5HYI8 236 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 C1orf141Q5JVX7 400 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SARM1Q6SZW1 724 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 FAM83HQ6ZRV2 1179 aaPredicted RBP6.14□□□□□ -1.43
COPS3-205ENST00000463097 CHST9Q7L1S5 443 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 C12orf76Q8N812 135 aaPredicted RBP6.14□□□□□ -1.43
COPS3-205ENST00000463097 ADPRHL1Q8NDY3 354 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 CPEB3Q8NE35 698 aaKnown RBP6.14□□□□□ -1.43
COPS3-205ENST00000463097 CADM4Q8NFZ8 388 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 C2CD4CQ8TF44 421 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 FAM149B1Q96BN6 582 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 PGBD1Q96JS3 809 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 WDFY2Q96P53 400 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 ALG8Q9BVK2 526 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SLC32A1Q9H598 525 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 RABEP2Q9H5N1 569 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SH2D4AQ9H788 454 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 ZWILCHQ9H900 591 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SFXN1Q9H9B4 322 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 MRPL15Q9P015 296 aaKnown RBP6.14□□□□□ -1.43
COPS3-205ENST00000463097 HSPB7Q9UBY9 170 aa6.14□□□□□ -1.43
COPS3-205ENST00000463097 SUV39H1O43463 412 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 PROM1O43490 865 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 NUAK1O60285 661 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 CEP104O60308 925 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 NXPH3O95157 252 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 NDUFA10O95299 355 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 TSPAN15O95858 294 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 ZNF8P17098 575 aaPredicted RBP6.13□□□□□ -1.43
COPS3-205ENST00000463097 HOXB9P17482 250 aaPredicted RBP6.13□□□□□ -1.43
COPS3-205ENST00000463097 ACO1P21399 889 aaKnown RBP6.13□□□□□ -1.43
COPS3-205ENST00000463097 CD72P21854 359 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 MCM3P25205 808 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 GSTM2P28161 218 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 CDH8P55286 799 aa6.13□□□□□ -1.43
COPS3-205ENST00000463097 SHC2P98077 582 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms