RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 FGAP02671 866 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 MATKP42679 507 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 GRK6P43250 576 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 IL13RA1P78552 427 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 ROR1Q01973 937 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 CYP4A11Q02928 519 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 NCBP1Q09161 790 aaKnown RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 TWF1Q12792 350 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 DRP2Q13474 957 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 SART3Q15020 963 aaKnown RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 STILQ15468 1287 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 HLA-BQ31612 363 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 CEP55Q53EZ4 464 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 ARHGAP15Q53QZ3 475 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 WDR45BQ5MNZ6 344 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 VPS53Q5VIR6 699 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 TPGS2Q68CL5 300 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 OLFML1Q6UWY5 402 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 ZNF662Q6ZS27 426 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 MICALCLQ6ZW33 695 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 USP49Q70CQ1 688 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 FILIP1Q7Z7B0 1213 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 RHPN2Q8IUC4 686 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 SLC41A1Q8IVJ1 513 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 SMAP1Q8IYB5 467 aaPredicted RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 LSMEM2Q8N112 164 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 ENAHQ8N8S7 591 aaPredicted RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 TRIML1Q8N9V2 468 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 OR14K1Q8NGZ2 314 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 HASPINQ8TF76 798 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 SLC25A43Q8WUT9 341 aaPredicted RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 KCNE4Q8WWG9 221 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 MOCOSQ96EN8 888 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 CCDC51Q96ER9 411 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 ZNF419Q96HQ0 510 aaPredicted RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 SPATA32Q96LK8 384 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 PAAF1Q9BRP4 392 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 TOR3AQ9H497 397 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 EBF3Q9H4W6 596 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 PSTPIP2Q9H939 334 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 IL21RQ9HBE5 538 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 IFT122Q9HBG6 1241 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 HPS4Q9NQG7 708 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 SUCLA2Q9P2R7 463 aaPredicted RBP3.12□□□□□ -1.91
CD46-210ENST00000462968 GABBR1Q9UBS5 961 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 PCDHA6Q9UN73 950 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.12□□□□□ -1.91
CD46-210ENST00000462968 TNNQ9UQP3 1299 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 PCDHA8Q9Y5H6 950 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 PCDHA10Q9Y5I2 948 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 SHROOM3Q8TF72 1996 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 PHLPP2Q6ZVD8 1323 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 COL6A6A6NMZ7 2263 aa3.12□□□□□ -1.91
CD46-210ENST00000462968 ZFHX3Q15911 3703 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 PLXNB3Q9ULL4 1909 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 COL4A2P08572 1712 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 ASCC3Q8N3C0 2202 aaKnown RBP3.11□□□□□ -1.91
CD46-210ENST00000462968 IGKV6-21A0A0C4DH24 114 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 A0A1B0GTW7 788 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 CASTOR2A6NHX0 329 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 K7EQS6 105 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 TRAPPC3O43617 180 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 CYTH3O43739 400 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 HMMRO75330 724 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 ZNF217O75362 1048 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 RFPL3O75679 317 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 PRAMEF12O95522 483 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 FGF19O95750 216 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 HNRNPLP14866 589 aaKnown RBP eCLIP3.11□□□□□ -1.914e-7■□□□□ 9.2
CD46-210ENST00000462968 AKAP5P24588 427 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 U2AF2P26368 475 aaKnown RBP eCLIP3.11□□□□□ -1.914e-10■■■□□ 16.2
CD46-210ENST00000462968 SMARCA1P28370 1054 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 AXLP30530 894 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 MAN2A2P49641 1150 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 ARPP19P56211 112 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 CLDN6P56747 220 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 ERVPABLB-1P60509 514 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 HAND2P61296 217 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 FANCCQ00597 558 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 RIN1Q13671 783 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 PDGFRLQ15198 375 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 PCBP1Q15365 356 aaKnown RBP eCLIP3.11□□□□□ -1.91
CD46-210ENST00000462968 SF3A1Q15459 793 aaKnown RBP3.11□□□□□ -1.91
CD46-210ENST00000462968 IGFBP7Q16270 282 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 SLC35G1Q2M3R5 365 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 INAVAQ3KP66 663 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 ARL13BQ3SXY8 428 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 LINC00303Q3SY05 128 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 EOGTQ5NDL2 527 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 STXBP5Q5T5C0 1151 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 IFIT1BQ5T764 474 aaKnown RBP3.11□□□□□ -1.91
CD46-210ENST00000462968 GPR158Q5T848 1215 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 HES3Q5TGS1 186 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 NAIF1Q69YI7 327 aaPredicted RBP3.11□□□□□ -1.91
CD46-210ENST00000462968 CC2D1AQ6P1N0 951 aaPredicted RBP3.11□□□□□ -1.91
CD46-210ENST00000462968 NOTUMQ6P988 496 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 SRGAP1Q7Z6B7 1085 aa3.11□□□□□ -1.91
CD46-210ENST00000462968 SRRM1Q8IYB3 904 aaKnown RBP3.11□□□□□ -1.91
CD46-210ENST00000462968 TRMT2AQ8IZ69 625 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms