RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	EIF2S3	P41091	472 aa	Known RBP	11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	PSMD8	P48556	350 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	VASP	P50552	380 aa	Predicted RBP	11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	PLK1	P53350	603 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	C21orf59	P57076	290 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	ST8SIA6	P61647	398 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	CDH18	Q13634	790 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	RTP5	Q14D33	572 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	MEA1	Q16626	185 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	RAP1GAP2	Q684P5	730 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	TTI2	Q6NXR4	508 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	DENND1B	Q6P3S1	775 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	RRAGA	Q7L523	313 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	PPM1K	Q8N3J5	372 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	OR52K2	Q8NGK3	314 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	RFFL	Q8WZ73	363 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	CEP63	Q96MT8	703 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	NT5C1B	Q96P26	610 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	TSG101	Q99816	390 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	PRORY	Q9H606	182 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	METTL14	Q9HCE5	456 aa	Known RBP	11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	TJP2	Q9UDY2	1190 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	SARDH	Q9UL12	918 aa		11.53	□□□□□ -0.56
PTPN7-204	ENST00000462815	KCNU1	A8MYU2	1149 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	TLR4	O00206	839 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	P4HA2	O15460	535 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	YKT6	O15498	198 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	PLRG1	O43660	514 aa	Known RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	RNASEH1	O60930	286 aa	Known RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	MOCS2	O96007	188 aa	Predicted RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	IRAK1	P51617	712 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	TAS2R38	P59533	333 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	TARDBP	Q13148	414 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	ELAVL3	Q14576	367 aa	Known RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	TAF5	Q15542	800 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	PROX2	Q3B8N5	592 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	ARTN	Q5T4W7	220 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	HES3	Q5TGS1	186 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	AGBL4	Q5VU57	503 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	NAPEPLD	Q6IQ20	393 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	TMEM110	Q86TL2	294 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	CIR1	Q86X95	450 aa	Predicted RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	LGI2	Q8N0V4	545 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	EID2	Q8N6I1	236 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	GANC	Q8TET4	914 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	STK32A	Q8WU08	396 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	NXPE2	Q96DL1	559 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	SERAC1	Q96JX3	654 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	BTN2A3P	Q96KV6	586 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	OMD	Q99983	421 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	DDX50	Q9BQ39	737 aa	Known RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	GDF3	Q9NR23	364 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	AASDHPPT	Q9NRN7	309 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	OR51B4	Q9Y5P0	310 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	MYLK	Q15746	1914 aa		11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.52	□□□□□ -0.57
PTPN7-204	ENST00000462815	TYW5	A2RUC4	315 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815		E5RJQ4	531 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	ATP9B	O43861	1147 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	RTN2	O75298	545 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	TRUB2	O95900	331 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	PRB1	P04280	392 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	ITGAV	P06756	1048 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	GIMD1	P0DJR0	217 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	CDK4	P11802	303 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	ANP32A	P39687	249 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	ABCG1	P45844	678 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	NUMB	P49757	651 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	MARS	P56192	900 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	SFSWAP	Q12872	951 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	SLC12A1	Q13621	1099 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	OTUD1	Q5VV17	481 aa	Predicted RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	FOXR2	Q6PJQ5	311 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	PCSK4	Q6UW60	755 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	TRIM69	Q86WT6	500 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	CHSY1	Q86X52	802 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	TRIM59	Q8IWR1	403 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	CCAR2	Q8N163	923 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	CACTIN-AS1	Q8N1I8	211 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	MFSD2A	Q8NA29	543 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	EHBP1	Q8NDI1	1231 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	OR14C36	Q8NHC7	312 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	SNIP1	Q8TAD8	396 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	PIP4K2C	Q8TBX8	421 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	SLC2A13	Q96QE2	648 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	SPAG5	Q96R06	1193 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	NRSN2	Q9GZP1	204 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	KDM4C	Q9H3R0	1056 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	CAAP1	Q9H8G2	361 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	POPDC2	Q9HBU9	364 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	ACP6	Q9NPH0	428 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	TPX2	Q9ULW0	747 aa	Known RBP	11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	RAI2	Q9Y5P3	530 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	PTPRQ	Q9UMZ3	2332 aa		11.51	□□□□□ -0.57
PTPN7-204	ENST00000462815	PPP1R3G	B7ZBB8	358 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	RNF103	O00237	685 aa		11.5	□□□□□ -0.57
PTPN7-204	ENST00000462815	SLC7A4	O43246	635 aa		11.5	□□□□□ -0.57

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