RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MAPK6Q16659 721 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 FAM214AQ32MH5 1076 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 DCAF17Q5H9S7 520 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 FBXO46Q6PJ61 603 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 INTS8Q75QN2 995 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 ZSCAN30Q86W11 494 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 GPD1LQ8N335 351 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 KLHDC9Q8NEP7 349 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 SLC35C1Q96A29 364 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 SAAL1Q96ER3 474 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 PAWRQ96IZ0 340 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 ZBTB45Q96K62 511 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 TCF25Q9BQ70 676 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 NUP58Q9BVL2 599 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 NFKBIZQ9BYH8 718 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 INO80BQ9C086 356 aaPredicted RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 ENKD1Q9H0I2 346 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 FZD8Q9H461 694 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 MMRN2Q9H8L6 949 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 KIAA1586Q9HCI6 787 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 HDAC6Q9UBN7 1215 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
UBE4B-204ENST00000462658 STYXL1Q9Y6J8 313 aa7.86□□□□□ -1.15
UBE4B-204ENST00000462658 TTC26A0AVF1 554 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ZNF233A6NK53 670 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 PATE3B3GLJ2 98 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 K7ESM1 405 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ACKR2O00590 384 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 KIAA0391O15091 583 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CLDN3O15551 220 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 EXTL3O43909 919 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 MFAP3LO75121 409 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ITGA10O75578 1167 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ZRANB2O95218 330 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 LDHAP00338 332 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 S100BP04271 92 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 GYPCP04921 128 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 EDN1P05305 212 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ASGR1P07306 291 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 SKILP12757 684 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 SYN1P17600 705 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 TRIM21P19474 475 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 MSNP26038 577 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CST5P28325 142 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 RECQLP46063 649 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 FXR1P51114 621 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 GPC3P51654 580 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 VAMP7P51809 220 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 NLRP11P59045 1033 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 MBTD1Q05BQ5 628 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 BFSP1Q12934 665 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 SNRNP35Q16560 246 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 FAM187BQ17R55 369 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 MST1LQ2TV78 715 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 LCE4AQ5TA78 99 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 FAM111BQ6SJ93 734 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CXCL17Q6UXB2 119 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 SRGAP1Q7Z6B7 1085 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ZNF410Q86VK4 478 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CBWD2Q8IUF1 395 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CNGA4Q8IV77 575 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 TC2NQ8N9U0 490 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 PCSK9Q8NBP7 692 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 NEK11Q8NG66 645 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 Q8TCH9 128 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ZNF480Q8WV37 535 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 IQCDQ96DY2 449 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CCDC51Q96ER9 411 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 SCLT1Q96NL6 688 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 PANX2Q96RD6 677 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 ACO2Q99798 780 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 FAM213AQ9BRX8 229 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 TCHPQ9BT92 498 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 FAM49AQ9H0Q0 323 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 MINDY3Q9H8M7 445 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 PRMT7Q9NVM4 692 aaPredicted RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 IP6K2Q9UHH9 426 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 AGO2Q9UKV8 859 aaKnown RBP7.85□□□□□ -1.15
UBE4B-204ENST00000462658 INTUQ9ULD6 942 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 CAPN11Q9UMQ6 739 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 SIK3Q9Y2K2 1263 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 FRMPD3Q5JV73 1810 aa7.85□□□□□ -1.15
UBE4B-204ENST00000462658 A0A0B4J269 797 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 NRP1O14786 923 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 STX10O60499 249 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 ZNF623O75123 536 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 GPR32O75388 356 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 CSDE1O75534 798 aaKnown RBP7.84□□□□□ -1.15
UBE4B-204ENST00000462658 TOM1L1O75674 476 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 ADRB2P07550 413 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 TRIM49P0CI25 452 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 TRIM49CP0CI26 452 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 HOXC8P31273 242 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 KRT9P35527 623 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 FMO5P49326 533 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 CCZ1BP86790 482 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 CCZ1P86791 482 aaPredicted RBP7.84□□□□□ -1.15
UBE4B-204ENST00000462658 PRPF4BQ13523 1007 aaKnown RBP7.84□□□□□ -1.15
UBE4B-204ENST00000462658 EXOC3L4Q17RC7 722 aa7.84□□□□□ -1.15
UBE4B-204ENST00000462658 ATF7IP2Q5U623 682 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms