RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 PIGVQ9NUD9 493 aa9.21□□□□□ -0.94
DDX39B-216ENST00000462421 ARHGEF38Q9NXL2 777 aa9.21□□□□□ -0.94
DDX39B-216ENST00000462421 EVLQ9UI08 416 aaPredicted RBP9.21□□□□□ -0.94
DDX39B-216ENST00000462421 NOCTQ9UK39 431 aaKnown RBP9.21□□□□□ -0.94
DDX39B-216ENST00000462421 SLC6A14Q9UN76 642 aa9.21□□□□□ -0.94
DDX39B-216ENST00000462421 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.94
DDX39B-216ENST00000462421 HS3ST4Q9Y661 456 aa9.21□□□□□ -0.94
DDX39B-216ENST00000462421 ATXN2Q99700 1313 aaKnown RBP9.21□□□□□ -0.94
DDX39B-216ENST00000462421 A0A1B0GTW7 788 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 LRRC53A6NM62 1247 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 SLC30A4O14863 429 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 FSBPO95073 299 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 SEMA4FO95754 770 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CER1O95813 267 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CYP1A1P04798 512 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ATP1A3P13637 1013 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 HOXC13P31276 330 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 PTPN9P43378 593 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 DNA2P51530 1060 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 TPMTP51580 245 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 SGSHP51688 502 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CLCN6P51797 869 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 LIMK1P53667 647 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 FANCCQ00597 558 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 FMO1Q01740 532 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 RAD51Q06609 339 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CAMK2GQ13555 558 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 POLD3Q15054 466 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 HNRNPA1L2Q32P51 320 aaKnown RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ZSCAN23Q3MJ62 389 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ODF2Q5BJF6 829 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CFAP58Q5T655 872 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 STPG1Q5TH74 334 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ACAD10Q6JQN1 1059 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 USP30Q70CQ3 517 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 TFAP2DQ7Z6R9 452 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 SLFN11Q7Z7L1 901 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 PHLDB2Q86SQ0 1253 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ADIPOR2Q86V24 386 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CIR1Q86X95 450 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 PHF13Q86YI8 300 aaPredicted RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 RXFP2Q8WXD0 754 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 RMDN1Q96DB5 314 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 TBC1D31Q96DN5 1066 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 VCPIP1Q96JH7 1222 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 MCEEQ96PE7 176 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ATP13A1Q9HD20 1204 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 ITM2CQ9NQX7 267 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 HAUS2Q9NVX0 235 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 FBXL12Q9NXK8 326 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 CLEC4EQ9ULY5 219 aa9.2□□□□□ -0.94
DDX39B-216ENST00000462421 LUC7L2Q9Y383 392 aaKnown RBP9.2□□□□□ -0.94
DDX39B-216ENST00000462421 A0A1B0GTH6 734 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 CBX4O00257 560 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 ALOX15BO15296 676 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 BCAT2O15382 392 aaPredicted RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PRPSAP2O60256 369 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 RAMP2O60895 175 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PRNPP04156 253 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 SERPINF2P08697 491 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 C5AR1P21730 350 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 ITPKAP23677 461 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PSMA2P25787 234 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 FLT3P36888 993 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 SSR1P43307 286 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 MAPKAPK2P49137 400 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 SLC20A2Q08357 652 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 HNRNPDQ14103 355 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 NCAPHQ15003 741 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 SUZ12Q15022 739 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 CST6Q15828 149 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 HS1BP3Q53T59 392 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 C2CD6Q53TS8 623 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 ZFYVE27Q5T4F4 411 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 DCAF12L1Q5VU92 463 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PRPF39Q86UA1 669 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 LUZP1Q86V48 1076 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 MMAAQ8IVH4 418 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 DRC7Q8IY82 874 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 EMC1Q8N766 993 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 ZNF366Q8N895 744 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 DCAF4L2Q8NA75 395 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 ZNF653Q96CK0 615 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 RPL10LQ96L21 214 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 MKRN2Q9H000 416 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 SLC6A17Q9H1V8 727 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 TMEM245Q9H330 911 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PABPC3Q9H361 631 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PARD6AQ9NPB6 346 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 PRSS16Q9NQE7 514 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 USP36Q9P275 1121 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 OR12D3Q9UGF7 316 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 XPO7Q9UIA9 1087 aaKnown RBP9.19□□□□□ -0.94
DDX39B-216ENST00000462421 LCMT1Q9UIC8 334 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 FZD4Q9ULV1 537 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 CACNA1IQ9P0X4 2223 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 CACNA1AO00555 2505 aa9.19□□□□□ -0.94
DDX39B-216ENST00000462421 ILVBLA1L0T0 632 aa9.18□□□□□ -0.94
DDX39B-216ENST00000462421 ZSCAN5CA6NGD5 496 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms