RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 LENG1Q96BZ8 264 aaPredicted RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 RBM38Q9H0Z9 239 aaKnown RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 PRMT7Q9NVM4 692 aaPredicted RBP18.86■□□□□ 0.61
HPS3-204ENST00000462030 HES2Q9Y543 173 aa18.86■□□□□ 0.61
HPS3-204ENST00000462030 A0A096LPK6 155 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 SRGAP2BP0DMP2 458 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 CCDC130P13994 396 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 DPEP1P16444 411 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 EPHA3P29320 983 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 IGBP1P78318 339 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 RBP5P82980 135 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 MS4A2Q01362 244 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 METTL21CQ5VZV1 264 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 IYDQ6PHW0 289 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 BNC2Q6ZN30 1099 aaPredicted RBP18.85■□□□□ 0.61
HPS3-204ENST00000462030 FAM131BQ86XD5 332 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 TICAM1Q8IUC6 712 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 HACE1Q8IYU2 909 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 KYQ8NBH2 561 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 ISL2Q96A47 359 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 ZNF669Q96BR6 464 aaPredicted RBP18.85■□□□□ 0.61
HPS3-204ENST00000462030 RCN3Q96D15 328 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 GATA5Q9BWX5 397 aaPredicted RBP18.85■□□□□ 0.61
HPS3-204ENST00000462030 R3HDMLQ9H3Y0 253 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 Q9H521 79 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 PREBQ9HCU5 417 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 TMPRSS4Q9NRS4 437 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 GTF2IRD1Q9UHL9 959 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 RAB26Q9ULW5 256 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 A0A0G2JMZ2 1700 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 LRRC37A2A6NM11 1700 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 CITO14578 2027 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 HACD1B0YJ81 288 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 PPEF2O14830 753 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 CFLARO15519 480 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 HNRNPRO43390 633 aaKnown RBP18.85■□□□□ 0.61
HPS3-204ENST00000462030 USP12O75317 370 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 TGFB3P10600 412 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 THRAP10827 490 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 MYLK3Q32MK0 819 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 LSM12Q3MHD2 195 aaKnown RBP18.85■□□□□ 0.61
HPS3-204ENST00000462030 PIGGQ5H8A4 983 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 C6orf52Q5T4I8 152 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 B3GNT6Q6ZMB0 384 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 ACVR1CQ8NER5 493 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 OR52K1Q8NGK4 314 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 AGAP3Q96P47 875 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 SERPINI1Q99574 410 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 FERMT1Q9BQL6 677 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 NAT9Q9BTE0 207 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 CXCL16Q9H2A7 254 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 SNX9Q9Y5X1 595 aa18.85■□□□□ 0.61
HPS3-204ENST00000462030 A0A087WZ62 844 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 TMEM114B3SHH9 223 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 TRIM13O60858 407 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 LCP1P13796 627 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 DPP6P42658 865 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 LIMK2P53671 638 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 CDKL1Q00532 357 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 TNFAIP2Q03169 654 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 CEACAM7Q14002 265 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 C16orf89Q6UX73 402 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 LCA5Q86VQ0 697 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 TP53INP2Q8IXH6 220 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 ZNF567Q8N184 647 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 BHLHE22Q8NFJ8 381 aaPredicted RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 ZFP28Q8NHY6 868 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 PRPF18Q99633 342 aaKnown RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 FDXACB1Q9BRP7 624 aaPredicted RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 DDX18Q9NVP1 670 aaKnown RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 GNEQ9Y223 722 aaKnown RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 RGSL1A5PLK6 1076 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 ARF4P18085 180 aaPredicted RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 ITGA7Q13683 1181 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 SPANXN3Q5MJ09 141 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 PLPPR4Q7Z2D5 763 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 CLEC14AQ86T13 490 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 MICALL2Q8IY33 904 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 EXOC8Q8IYI6 725 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 GALNT4Q8N4A0 578 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 CCNYQ8ND76 341 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 KBTBD7Q8WVZ9 684 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 COPS5Q92905 334 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 PKP2Q99959 881 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 MRPS26Q9BYN8 205 aaKnown RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 DPEP3Q9H4B8 488 aa18.84■□□□□ 0.61
HPS3-204ENST00000462030 MAGED2Q9UNF1 606 aaPredicted RBP18.84■□□□□ 0.61
HPS3-204ENST00000462030 STX16-NPEPL1H3BU86 382 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 SETSIPP0DME0 302 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 ENO3P13929 434 aaPredicted RBP18.83■□□□□ 0.61
HPS3-204ENST00000462030 SPRP35270 261 aaPredicted RBP18.83■□□□□ 0.61
HPS3-204ENST00000462030 ARL4AP40617 200 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 PGGT1BP53609 377 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 TMEM198Q66K66 360 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 C7orf31Q8N865 590 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 MARK4Q96L34 752 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 PDGFDQ9GZP0 370 aaPredicted RBP18.83■□□□□ 0.61
HPS3-204ENST00000462030 ADAM28Q9UKQ2 775 aa18.83■□□□□ 0.61
HPS3-204ENST00000462030 AK5Q9Y6K8 562 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms