RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 FGF11Q92914 225 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 ERLEC1Q96DZ1 483 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 CNOT6LQ96LI5 555 aaKnown RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 ZSCAN31Q96LW9 406 aaPredicted RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 NLRP4Q96MN2 994 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 CLIC6Q96NY7 704 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 SPATA9Q9BWV2 254 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 NXF3Q9H4D5 531 aaKnown RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 SLITRK6Q9H5Y7 841 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 L2HGDHQ9H9P8 463 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 CYP4F11Q9HBI6 524 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 CD93Q9NPY3 652 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 AGPAT5Q9NUQ2 364 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 SUCLA2Q9P2R7 463 aaPredicted RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 DDX25Q9UHL0 483 aaKnown RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.72□□□□□ -1.65
CNN3-204ENST00000461018 LIMCH1Q9UPQ0 1083 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 TRAF6Q9Y4K3 522 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 INSL5Q9Y5Q6 135 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 MYO18AQ92614 2054 aaKnown RBP4.72□□□□□ -1.65
CNN3-204ENST00000461018 CENPEQ02224 2701 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 SF3B1O75533 1304 aaKnown RBP eCLIP4.72□□□□□ -1.65
CNN3-204ENST00000461018 CNTNAP2Q9UHC6 1331 aa4.72□□□□□ -1.65
CNN3-204ENST00000461018 IGKV6-21A0A0C4DH24 114 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 K7EQS6 105 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 KCNK3O14649 394 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 PRRG1O14668 218 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 PDPK1O15530 556 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 AKAP8O43823 692 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 LYPLA2O95372 231 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 BAG4O95429 457 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 CTDNEP1O95476 244 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TDP2O95551 362 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 AFPP02771 609 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 LTFP02788 710 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 PRKCBP05771 671 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 XRCC6P12956 609 aaKnown RBP eCLIP4.71□□□□□ -1.66
CNN3-204ENST00000461018 FDPSP14324 419 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 ITGB6P18564 788 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 KRT2P35908 639 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 BRCC3P46736 316 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 QARSP47897 775 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 TRAPPC10P48553 1259 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 DNM2P50570 870 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 EPHA5P54756 1037 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 PSMC5P62195 406 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 HMGN5P82970 282 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 PRKCEQ02156 737 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 GRIK2Q13002 908 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TARDBPQ13148 414 aaKnown RBP eCLIP4.71□□□□□ -1.66
CNN3-204ENST00000461018 STK3Q13188 491 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 ADAM9Q13443 819 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 RUNX3Q13761 415 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TRIM29Q14134 588 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 PCBP1Q15365 356 aaKnown RBP eCLIP4.71□□□□□ -1.66
CNN3-204ENST00000461018 EPHA7Q15375 998 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 NAB2Q15742 525 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 ME3Q16798 604 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 PLEKHG6Q3KR16 790 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 LINC00303Q3SY05 128 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 ARHGAP29Q52LW3 1261 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 EMC4Q5J8M3 183 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 MIER3Q7Z3K6 550 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 ZNF410Q86VK4 478 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TRIM48Q8IWZ4 208 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 C4orf19Q8IY42 314 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 GALNT15Q8N3T1 639 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TXNDC5Q8NBS9 432 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 NSUN7Q8NE18 718 aaKnown RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 GJA10Q969M2 543 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TMEM176AQ96HP8 235 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 P2RY13Q9BPV8 354 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 INO80BQ9C086 356 aaPredicted RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 CDIP1Q9H305 208 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 UNC45AQ9H3U1 944 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 SLC6A20Q9NP91 592 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 ASH2LQ9UBL3 628 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 TBX20Q9UMR3 447 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 CCL26Q9Y258 94 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 KIF3AQ9Y496 699 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 HEMK1Q9Y5R4 338 aaPredicted RBP4.71□□□□□ -1.66
CNN3-204ENST00000461018 MED13Q9UHV7 2174 aa4.71□□□□□ -1.66
CNN3-204ENST00000461018 NF1P21359 2839 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 ANO9A1A5B4 782 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 MROH6A6NGR9 719 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 K7ESM1 405 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 SGK1O00141 431 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 PTGESO14684 152 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 ASAP2O43150 1006 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 SOAT2O75908 522 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 SRGAP2CP0DJJ0 459 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 JUPP14923 745 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 MUTP22033 750 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 GJA4P35212 333 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 MCM2P49736 904 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 TLE1Q04724 770 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 POU5F1BQ06416 359 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 ZNF33AQ06730 810 aa4.7□□□□□ -1.66
CNN3-204ENST00000461018 KRTAP1-1Q07627 177 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms