RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 MED21Q13503 144 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 TMEM259Q4ZIN3 620 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 TAS1R1Q7RTX1 841 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 DHDDSQ86SQ9 333 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 C1orf127Q8N9H9 656 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 FBXO36Q8NEA4 188 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 OR5B17Q8NGF7 314 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 VN1R3Q9BXE9 311 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 ZNF518BQ9C0D4 1074 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 MTMR12Q9C0I1 747 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 ENTPD7Q9NQZ7 604 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 PTTG2Q9NZH5 202 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 ITGA11Q9UKX5 1188 aa16.18■□□□□ 0.18
CMTM3-203ENST00000460097 PTPRJQ12913 1337 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 SGK1O00141 431 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 SNNO75324 88 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-203ENST00000460097 CXCL14O95715 111 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 CTSAP10619 480 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 KRT10P13645 584 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 ETS1P14921 441 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 BGNP21810 368 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 IRS1P35568 1242 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 USP41Q3LFD5 358 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 FNBP1LQ5T0N5 605 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 TTC39BQ5VTQ0 682 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-203ENST00000460097 BBS12Q6ZW61 710 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 ARCQ7LC44 396 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 TTC7BQ86TV6 843 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 TREML1Q86YW5 311 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 ANKMY2Q8IV38 441 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
CMTM3-203ENST00000460097 ZBP1Q9H171 429 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 SOX13Q9UN79 622 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 IKBKGQ9Y6K9 419 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 PLXNA4Q9HCM2 1894 aa16.17■□□□□ 0.18
CMTM3-203ENST00000460097 RNASEH1O60930 286 aaKnown RBP16.16■□□□□ 0.18
CMTM3-203ENST00000460097 ITGB3P05106 788 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 INHBAP08476 426 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 KRT19P08727 400 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 PAX3P23760 479 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 CPOXP36551 454 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 BRCC3P46736 316 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 AP3M2P53677 418 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 RBP5P82980 135 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 CUL2Q13617 745 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 EFTUD2Q15029 972 aaKnown RBP eCLIP16.16■□□□□ 0.18
CMTM3-203ENST00000460097 MSS51Q4VC12 460 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 STXBP5Q5T5C0 1151 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 LGSNQ5TDP6 509 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 FAM171A1Q5VUB5 890 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 C1orf146Q5VVC0 180 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 PLPP4Q5VZY2 271 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 SLC26A11Q86WA9 606 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 ZNF516Q92618 1163 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 DGCR14Q96DF8 476 aaKnown RBP16.16■□□□□ 0.18
CMTM3-203ENST00000460097 SERAC1Q96JX3 654 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 FAM84AQ96KN4 292 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 FAM111AQ96PZ2 611 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 HERC2P3Q9BVR0 1158 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 FAM96AQ9H5X1 160 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 USTQ9Y2C2 406 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 PLLPQ9Y342 182 aa16.16■□□□□ 0.18
CMTM3-203ENST00000460097 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.16■□□□□ 0.18
CMTM3-203ENST00000460097 FAM237BA0A1B0GVD1 139 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 A0A1B0GVG6 124 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 C3orf70A6NLC5 250 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 COPEO14579 308 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 PPEF2O14830 753 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 C4BPAP04003 597 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 ZCCHC18P0CG32 403 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 CCDC166P0CW27 439 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 MYL4P12829 197 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 VAV1P15498 845 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 GNA15P30679 374 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 POLR2BP30876 1174 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 CA8P35219 290 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 ZNF132P52740 706 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 LILRA4P59901 499 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 HSF5Q4G112 596 aaPredicted RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TIGD5Q53EQ6 642 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TEX44Q53QW1 395 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 EFHC1Q5JVL4 640 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TMEM126BQ8IUX1 230 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 MRPL43Q8N983 215 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 HIC2Q96JB3 615 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 KLHL4Q9C0H6 718 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 NSUN3Q9H649 340 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 MRPL17Q9NRX2 175 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 A0A088AWK7 358 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 TMCC1O94876 653 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 KLHL2O95198 593 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 ASLP04424 464 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 URODP06132 367 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 RPL22P35268 128 aaKnown RBP16.15■□□□□ 0.18
CMTM3-203ENST00000460097 PNPLA4P41247 253 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 GLUD2P49448 558 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 ANKRD22Q5VYY1 191 aa16.15■□□□□ 0.18
CMTM3-203ENST00000460097 KAZNQ674X7 775 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms