RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 NDST4Q9H3R1 872 aa17.25■□□□□ 0.35
TMEM50B-205ENST00000459909 ABCB8Q9NUT2 735 aa17.25■□□□□ 0.35
TMEM50B-205ENST00000459909 RAB20Q9NX57 234 aa17.25■□□□□ 0.35
TMEM50B-205ENST00000459909 GGA2Q9UJY4 613 aa17.25■□□□□ 0.35
TMEM50B-205ENST00000459909 MYH10P35580 1976 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 SLC12A8A0AV02 714 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 TLR4O00206 839 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 DXOO77932 396 aaKnown RBP17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 CSRP3P50461 194 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 CCR5P51681 352 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 ERVPABLB-1P60509 514 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 SRSF1Q07955 248 aaKnown RBP eCLIP17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 VAC14Q08AM6 782 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 MBLAC2Q68D91 279 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 KANSL1Q7Z3B3 1105 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 ARHGAP18Q8N392 663 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 OR2T34Q8NGX1 318 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 DPH1Q9BZG8 443 aa17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 LIMA1Q9UHB6 759 aaKnown RBP17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 TPX2Q9ULW0 747 aaKnown RBP17.24■□□□□ 0.35
TMEM50B-205ENST00000459909 C10orf142B7Z368 130 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 WNT9AO14904 365 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 P4HA2O15460 535 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 RNASEH1O60930 286 aaKnown RBP17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 COPB1P53618 953 aaKnown RBP17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 PROX2Q3B8N5 592 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 MIIPQ5JXC2 388 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 SPOPLQ6IQ16 392 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 RSRC2Q7L4I2 434 aaKnown RBP17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 TAF4BQ92750 862 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 SERAC1Q96JX3 654 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 NEUROG2Q9H2A3 272 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 SERGEFQ9UGK8 458 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 FZD4Q9ULV1 537 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 COQ4Q9Y3A0 265 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 PCDHB1Q9Y5F3 818 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 MYLKQ15746 1914 aa17.23■□□□□ 0.35
TMEM50B-205ENST00000459909 A0A1W2PP55 124 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 KLK10O43240 276 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 ASS1P00966 412 aaKnown RBP17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 SERPINC1P01008 464 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 MPOP05164 745 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 POLR2EP19388 210 aaKnown RBP17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 ASPAP45381 313 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 HARS2P49590 506 aaKnown RBP17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 TRIP4Q15650 581 aaPredicted RBP17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 FILIP1LQ4L180 1135 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 FKBP15Q5T1M5 1219 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 TMA16Q96EY4 203 aaKnown RBP17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 CRACR2AQ9BSW2 395 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 NT5C1AQ9BXI3 368 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 DUSP16Q9BY84 665 aa17.22■□□□□ 0.35
TMEM50B-205ENST00000459909 PLXNA2O75051 1894 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 PMM2O15305 246 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 RNASEH2AO75792 299 aaKnown RBP17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 LSSP48449 732 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 GABREP78334 506 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 INCA1Q0VD86 236 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 LRMPQ12912 555 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 CST6Q15828 149 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 GBP6Q6ZN66 633 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 OMDQ99983 421 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 INTS2Q9H0H0 1204 aaKnown RBP17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 MTG2Q9H4K7 406 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 STOML2Q9UJZ1 356 aa17.21■□□□□ 0.35
TMEM50B-205ENST00000459909 LGALS16A8MUM7 142 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 MID1O15344 667 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 MAGEC1O60732 1142 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 ST8SIA6P61647 398 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 YWHAGP61981 247 aaKnown RBP eCLIP17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 ZNF211Q13398 564 aaPredicted RBP17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 EXOC3L4Q17RC7 722 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 HNRNPA1L2Q32P51 320 aaKnown RBP17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 CDCP2Q5VXM1 449 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 PRICKLE2Q7Z3G6 844 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 SPATS2Q86XZ4 545 aaKnown RBP17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 MFSD2AQ8NA29 543 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 EHBP1Q8NDI1 1231 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 MYO19Q96H55 970 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 NT5C1BQ96P26 610 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 DEPDC7Q96QD5 511 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 RBSNQ9H1K0 784 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 POLR1BQ9H9Y6 1135 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 APOBEC3GQ9HC16 384 aaKnown RBP17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 IL17BQ9UHF5 180 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 SSUH2Q9Y2M2 353 aa17.2■□□□□ 0.34
TMEM50B-205ENST00000459909 GTPBP10A4D1E9 387 aaKnown RBP17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 SIGLEC6O43699 453 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 SIN3BO75182 1162 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 USP12O75317 370 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 LATS1O95835 1130 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 DAB2P98082 770 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 FANCCQ00597 558 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 UBXN1Q04323 297 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 ADGRF1Q5T601 910 aa17.19■□□□□ 0.34
TMEM50B-205ENST00000459909 NAPEPLDQ6IQ20 393 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms