RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ADAM22Q9P0K1 906 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 SLC6A14Q9UN76 642 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 TBC1D30Q9Y2I9 924 aa16.6■□□□□ 0.25
COL7A1-203ENST00000459756 EDDM13A0A1B0GTR0 161 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 C4orf47A7E2U8 309 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 MEI4A8MW99 385 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 RNASEH1O60930 286 aaKnown RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SIN3BO75182 1162 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 ENDOD1O94919 500 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 CFIP05156 583 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 CALB1P05937 261 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SERPINF2P08697 491 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 MZF1P28698 734 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SDC4P31431 198 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 GGCXP38435 758 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 NNMTP40261 264 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 IRAK1P51617 712 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 GSCP56915 257 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 GFPT1Q06210 699 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 PTP4A2Q12974 167 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 IQCB1Q15051 598 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SKOR2Q2VWA4 1001 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 TTC31Q49AM3 519 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 C9orf64Q5T6V5 341 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 DAB2IPQ5VWQ8 1189 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 RGL4Q8IZJ4 473 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 EMC1Q8N766 993 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 HAPLN3Q96S86 360 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 FEM1AQ9BSK4 669 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 MTG2Q9H4K7 406 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SEPT11Q9NVA2 429 aaKnown RBP16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SUSD2Q9UGT4 822 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SLCO3A1Q9UIG8 710 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 SCML1Q9UN30 329 aa16.59■□□□□ 0.25
COL7A1-203ENST00000459756 IGLV3-10A0A075B6K4 115 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 A0A1W2PQC6 194 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 MED19A0JLT2 244 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-203ENST00000459756 DRGXA6NNA5 263 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 METTL12A8MUP2 240 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 TTC34A8MYJ7 566 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 GNSP15586 552 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 PTPN9P43378 593 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 VASPP50552 380 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-203ENST00000459756 ATP11AP98196 1134 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 C1QBPQ07021 282 aaKnown RBP16.58■□□□□ 0.24
COL7A1-203ENST00000459756 SFSWAPQ12872 951 aaKnown RBP16.58■□□□□ 0.24
COL7A1-203ENST00000459756 PPM1JQ5JR12 505 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 FAM124AQ86V42 546 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 RXFP2Q8WXD0 754 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 DNASE2BQ8WZ79 361 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 ALG14Q96F25 216 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 RPL10LQ96L21 214 aaKnown RBP16.58■□□□□ 0.24
COL7A1-203ENST00000459756 CAPN10Q9HC96 672 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 OR51B4Q9Y5P0 310 aa16.58■□□□□ 0.24
COL7A1-203ENST00000459756 A0A1B0GTH6 734 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 C2CD4BA6NLJ0 364 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 CDX4O14627 284 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-203ENST00000459756 CNTN5O94779 1100 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 KRT3P12035 628 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 ENGP17813 658 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 STK19P49842 368 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-203ENST00000459756 TPM4P67936 248 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 CCDC14Q49A88 953 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 ALFQ53S48 1182 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 USP30Q70CQ3 517 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 MON1BQ7L1V2 547 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 STRADAQ7RTN6 431 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 IRF2BP2Q7Z5L9 587 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 PHLDB2Q86SQ0 1253 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 SETD3Q86TU7 594 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-203ENST00000459756 FAM131BQ86XD5 332 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 C3orf20Q8ND61 904 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 JOSD2Q8TAC2 188 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 BAP1Q92560 729 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 SELENOOQ9BVL4 669 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 BTBD1Q9H0C5 482 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 MUC3BQ9H195 1237 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 PABPC3Q9H361 631 aaKnown RBP16.57■□□□□ 0.24
COL7A1-203ENST00000459756 TMPRSS4Q9NRS4 437 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 SLC25A13Q9UJS0 675 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 VPS28Q9UK41 221 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 NCKAP1Q9Y2A7 1128 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 SNX10Q9Y5X0 201 aa16.57■□□□□ 0.24
COL7A1-203ENST00000459756 E9PAM4 449 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 SEMA4FO95754 770 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 SERPINC1P01008 464 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 ACSL1P33121 698 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 ELAVL3Q14576 367 aaKnown RBP16.56■□□□□ 0.24
COL7A1-203ENST00000459756 CST6Q15828 149 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 CDO1Q16878 200 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 C15orf59Q2T9L4 293 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-203ENST00000459756 ARL13BQ3SXY8 428 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 DCAF12L1Q5VU92 463 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 PPP1R2P3Q6NXS1 205 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 OR52K2Q8NGK3 314 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 CENPIQ92674 756 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-203ENST00000459756 PTPRN2Q92932 1015 aa16.56■□□□□ 0.24
COL7A1-203ENST00000459756 SGK2Q9HBY8 427 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms