RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LOC400499M0QZD8 3231 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 KCNU1A8MYU2 1149 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 PPP1R3GB7ZBB8 358 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 F5H5T6 163 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 FGFR1OPO95684 399 aaKnown RBP22.23■■□□□ 1.15
CPNE1-220ENST00000458038 TRUB2O95900 331 aaKnown RBP22.23■■□□□ 1.15
CPNE1-220ENST00000458038 CALCAP01258 141 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 IGLV3-25P01717 112 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 ABCB4P21439 1286 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 NUDT1P36639 197 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 ARRB1P49407 418 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-220ENST00000458038 VASPP50552 380 aaPredicted RBP22.23■■□□□ 1.15
CPNE1-220ENST00000458038 PLK1P53350 603 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 ACAP1Q15027 740 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 RAP1GAP2Q684P5 730 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 MMS22LQ6ZRQ5 1243 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 SLC6A18Q96N87 628 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 INTS2Q9H0H0 1204 aaKnown RBP22.23■■□□□ 1.15
CPNE1-220ENST00000458038 GDF3Q9NR23 364 aa22.23■■□□□ 1.15
CPNE1-220ENST00000458038 NYNRINQ9P2P1 1898 aaKnown RBP22.22■■□□□ 1.15
CPNE1-220ENST00000458038 LETM1O95202 739 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-220ENST00000458038 GLI1P08151 1106 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 CTSOP43234 321 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-220ENST00000458038 CAMK2BQ13554 666 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 KCNJ12Q14500 433 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 RABGAP1LQ5R372 815 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 DENND1BQ6P3S1 775 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 C19orf48Q6RUI8 117 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 DSG4Q86SJ6 1040 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 PDZD3Q86UT5 571 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 STK40Q8N2I9 435 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 OXR1Q8N573 874 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 OR14C36Q8NHC7 312 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 PTPRN2Q92932 1015 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 SPAG5Q96R06 1193 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 ERVMER34-1Q9H9K5 563 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 UBE2TQ9NPD8 197 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-220ENST00000458038 RAXQ9Y2V3 346 aa22.22■■□□□ 1.15
CPNE1-220ENST00000458038 ARID1BQ8NFD5 2236 aaPredicted RBP22.22■■□□□ 1.15
CPNE1-220ENST00000458038 A0A1B0GVM2 712 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 TCAF2A6NFQ2 919 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 E5RJQ4 531 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 ITGAVP06756 1048 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 MZF1P28698 734 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-220ENST00000458038 PSMD8P48556 350 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 ADPRHP54922 357 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 CDK17Q00537 523 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 EIF4EBP2Q13542 120 aaPredicted RBP22.21■■□□□ 1.15
CPNE1-220ENST00000458038 MORC3Q14149 939 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 COL28A1Q2UY09 1125 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 APCDD1Q8J025 514 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 AADATQ8N5Z0 425 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 SERAC1Q96JX3 654 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 RPL10LQ96L21 214 aaKnown RBP22.21■■□□□ 1.15
CPNE1-220ENST00000458038 EBF2Q9HAK2 575 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 ASNSD1Q9NWL6 643 aa22.21■■□□□ 1.15
CPNE1-220ENST00000458038 XPO7Q9UIA9 1087 aaKnown RBP22.21■■□□□ 1.15
CPNE1-220ENST00000458038 A0A1W2PR77 199 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 SLC7A4O43246 635 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 THAP12O43422 761 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 LATO43561 262 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 MAGEC1O60732 1142 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 LDOC1O95751 146 aaPredicted RBP22.2■■□□□ 1.14
CPNE1-220ENST00000458038 IL1BP01584 269 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 WNT1P04628 370 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 GNA15P30679 374 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 CCR1P32246 355 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 HNF1BP35680 557 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 IL9RQ01113 521 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 CYP4F3Q08477 520 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 PAK1Q13153 545 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 BECN1Q14457 450 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 EFHC1Q5JVL4 640 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 FAM46CQ5VWP2 391 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 PRPF39Q86UA1 669 aaKnown RBP22.2■■□□□ 1.14
CPNE1-220ENST00000458038 CCAR2Q8N163 923 aaKnown RBP22.2■■□□□ 1.14
CPNE1-220ENST00000458038 SAP25Q8TEE9 199 aa22.2■■□□□ 1.14
CPNE1-220ENST00000458038 PRMT1Q99873 361 aaKnown RBP22.2■■□□□ 1.14
CPNE1-220ENST00000458038 SRRTQ9BXP5 876 aaKnown RBP22.2■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3DA0A087WVF3 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3IA0A087WXS9 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3EA0A087X179 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3KA0A087X1G2 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3FA6NER0 549 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3LB9A6J9 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TLR4O00206 839 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 ENC1O14682 589 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3HP0C7X1 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 BMP6P22004 513 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 RXRGP48443 463 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 SNX16P57768 344 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 OVGP1Q12889 678 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3GQ6DHY5 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3CQ6IPX1 549 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 DHRS13Q6UX07 377 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 IQCHQ86VS3 1027 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 TBC1D3Q8IZP1 549 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-220ENST00000458038 MFSD2AQ8NA29 543 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 FAM131CQ96AQ9 280 aa22.19■■□□□ 1.14
CPNE1-220ENST00000458038 CYTH4Q9UIA0 394 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms