RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZBTB34Q8NCN2 500 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 ANKS1AQ92625 1134 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 KAT2BQ92831 832 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 LENG8Q96PV6 779 aaPredicted RBP5.62□□□□□ -1.51
VPS41-209ENST00000457055 ZNF747Q9BV97 191 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 NFKBIZQ9BYH8 718 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 UPF3BQ9BZI7 483 aaKnown RBP5.62□□□□□ -1.51
VPS41-209ENST00000457055 TRIM2Q9C040 744 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 AZI2Q9H6S1 392 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 SYNDIG1Q9H7V2 258 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 SCPEP1Q9HB40 452 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 PREBQ9HCU5 417 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 FARSBQ9NSD9 589 aaKnown RBP5.62□□□□□ -1.51
VPS41-209ENST00000457055 SNTG1Q9NSN8 517 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 TRPM5Q9NZQ8 1165 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 GRHPRQ9UBQ7 328 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 SIK3Q9Y2K2 1263 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 SBNO1A3KN83 1393 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 ROCK2O75116 1388 aaKnown RBP5.62□□□□□ -1.51
VPS41-209ENST00000457055 MTUS2Q5JR59 1369 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 DCCP43146 1447 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 ARHGAP31Q2M1Z3 1444 aa5.62□□□□□ -1.51
VPS41-209ENST00000457055 XRN1Q8IZH2 1706 aaKnown RBP5.62□□□□□ -1.51
VPS41-209ENST00000457055 A0A0U1RQK1 487 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 RNF103-CHMP3A0A140T963 221 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZNF320A2RRD8 509 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 TMEM131LA2VDJ0 1609 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 CAPN8A6NHC0 703 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PRR5-ARHGAP8B1AHC4 643 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 EIF3CLB5ME19 914 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 E7EVH7 732 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 H0YCG3 227 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 FZD9O00144 591 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 MYO1CO00159 1063 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 RNF103O00237 685 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 RGPD8O14715 1765 aaPredicted RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 ADAMTS3O15072 1205 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PROM1O43490 865 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SLC25A17O43808 307 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 FZD7O75084 574 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZNF623O75123 536 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 TACC1O75410 805 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SLPIP03973 132 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 RB1P06400 928 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 IVLP07476 585 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 DLDP09622 509 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZBTB48P10074 688 aaPredicted RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 MYL4P12829 197 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PRG2P13727 222 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ANXA8P13928 327 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PTPN2P17706 415 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 POLR2EP19388 210 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 POU3F2P20265 443 aaPredicted RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 GALP22466 123 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 NOS1P29475 1434 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 TTKP33981 857 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 BMI1P35226 326 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 KRT2P35908 639 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ACAA2P42765 397 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 MAGEA9P43362 315 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 OR1G1P47890 313 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 TUFMP49411 452 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 CPT1AP50416 773 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 CASP6P55212 293 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 KRT85P78386 507 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 KCNJ10P78508 379 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PHEXP78562 749 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 OTUD4Q01804 1114 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 DNAJC3Q13217 504 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 PLD1Q13393 1074 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ITGA7Q13683 1181 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZNF267Q14586 743 aaPredicted RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 STARD3Q14849 445 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SMAD2Q15796 467 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 INSCQ1MX18 579 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 IGSF11Q5DX21 431 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ANXA8L1Q5VT79 327 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 DCLRE1AQ6PJP8 1040 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 RANBP10Q6VN20 620 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZNF704Q6ZNC4 412 aaPredicted RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 MYPNQ86TC9 1320 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 STX12Q86Y82 276 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 RFX6Q8HWS3 928 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 EHBP1L1Q8N3D4 1523 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 EFHBQ8N7U6 833 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 ZNF321PQ8N8H1 164 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 OR2W6PQ8NHA6 318 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 DYDC1Q8WWB3 177 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SLC5A11Q8WWX8 675 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 CASKIN1Q8WXD9 1431 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 HERVK_113Q902F9 699 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 HTRA1Q92743 480 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 LRRC39Q96DD0 335 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SUCLG2Q96I99 432 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 MAELQ96JY0 434 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 EIF3CQ99613 913 aaKnown RBP5.61□□□□□ -1.51
VPS41-209ENST00000457055 CDC6Q99741 560 aa5.61□□□□□ -1.51
VPS41-209ENST00000457055 SH3GL2Q99962 352 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms