RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SNX32Q86XE0 403 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 LARGE2Q8N3Y3 721 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 DNERQ8NFT8 737 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ABHD11Q8NFV4 315 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 GPR150Q8NGU9 434 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 DTNBP1Q96EV8 351 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 GATA5Q9BWX5 397 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 CXCL16Q9H2A7 254 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 TP63Q9H3D4 680 aaPredicted RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 TRIT1Q9H3H1 467 aaKnown RBP4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 GPAMQ9HCL2 828 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 VTA1Q9NP79 307 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 EXD2Q9NVH0 621 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 PCSK1NQ9UHG2 260 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 DMTF1Q9Y222 760 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ERGIC3Q9Y282 383 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 NHSQ6T4R5 1651 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 C10orf71Q711Q0 1435 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 FOCADQ5VW36 1801 aa4.65□□□□□ -1.66
DEPDC1-202ENST00000456315 ATP6AP2A0A1C7CYW4 349 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 TLR3O15455 904 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MSI1O43347 362 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 TIPRLO75663 272 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ATP6AP2O75787 350 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MLYCDO95822 493 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MYCLP1P12525 358 aaPredicted RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MYL7Q01449 175 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC25A11Q02978 314 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 NSUN2Q08J23 767 aaKnown RBP eCLIP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ITGADQ13349 1161 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 RAB39AQ14964 217 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 TAZQ16635 292 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 AAK1Q2M2I8 961 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 DALRD3Q5D0E6 543 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 DPP8Q6V1X1 898 aaPredicted RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 PPP4R3CPQ6ZMV5 832 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 APLFQ8IW19 511 aaPredicted RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MFSD4AQ8N468 514 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 BBOF1Q8ND07 529 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF606Q8WXB4 792 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 UBE2FQ969M7 185 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 APOPT1Q96IL0 206 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 B3GNT4Q9C0J1 378 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CAB39LQ9H9S4 337 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 NXF1Q9UBU9 619 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 DNM3Q9UQ16 869 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 DGKBQ9Y6T7 804 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 LOC105371267A0A1B0GV96 52 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 GOLGA8TH3BQL2 631 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 UPK1AO00322 258 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC16A4O15374 487 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 LMNAP02545 664 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SPNP16150 400 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 PRKCHP24723 683 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SERPINB5P36952 375 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 NR1H2P55055 460 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 TPTEP56180 551 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 DMPKQ09013 629 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 KRT81Q14533 505 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CA9Q16790 459 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 KIF26BQ2KJY2 2108 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ARL13BQ3SXY8 428 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SEL1L2Q5TEA6 688 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 RGMBQ6NW40 437 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 FBXW8Q8N3Y1 598 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ADAMTS16Q8TE57 1224 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 RILPQ96NA2 401 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CCDC28BQ9BUN5 200 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 PARVGQ9HBI0 331 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CROTQ9UKG9 612 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SHOC2Q9UQ13 582 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 INVSQ9Y283 1065 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 N6AMT1Q9Y5N5 214 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ZHX2Q9Y6X8 837 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 G3V2L1 256 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ZBTB5O15062 677 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 USP12O75317 370 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 WEE2P0C1S8 567 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ATP6V1B2P21281 511 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ANXA13P27216 316 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CLCN7P51798 805 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 RPS3AP61247 264 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SPIDRQ14159 915 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 LRIT3Q3SXY7 679 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 PDCD4Q53EL6 469 aaKnown RBP4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 AAGABQ6PD74 315 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 UNC5AQ6ZN44 842 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CTAGE3PQ8IX95 158 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 KATNAL2Q8IYT4 538 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 SPATA6LQ8N4H0 392 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 ATXN7L3BQ96GX2 97 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 CPXM1Q96SM3 734 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 TIMMDC1Q9NPL8 285 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 PDLIM7Q9NR12 457 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 TMOD3Q9NYL9 352 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 HSPBP1Q9NZL4 362 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 HMGXB4Q9UGU5 601 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MTUS1Q9ULD2 1270 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 RABGAP1Q9Y3P9 1069 aa4.65□□□□□ -1.67
DEPDC1-202ENST00000456315 MCM3APO60318 1980 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms