RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CYB5D2Q8WUJ1 264 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 NTAN1Q96AB6 310 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 MCEEQ96PE7 176 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 MKRN2Q9H000 416 aaKnown RBP17.86■□□□□ 0.45
USP39-208ENST00000455732 SLC6A17Q9H1V8 727 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 TBC1D30Q9Y2I9 924 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 DOCK4Q8N1I0 1966 aa17.86■□□□□ 0.45
USP39-208ENST00000455732 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 IGHV1OR15-9A0A0B4J2B8 117 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 RTN2O75298 545 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 ZNF217O75362 1048 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 HNRNPH3P31942 346 aaKnown RBP17.85■□□□□ 0.45
USP39-208ENST00000455732 DHPSP49366 369 aaPredicted RBP17.85■□□□□ 0.45
USP39-208ENST00000455732 RPL7AP62424 266 aaKnown RBP17.85■□□□□ 0.45
USP39-208ENST00000455732 MAMLD1Q13495 774 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 CAMK2GQ13555 558 aaPredicted RBP17.85■□□□□ 0.45
USP39-208ENST00000455732 ARID5BQ14865 1188 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 CACNA1EQ15878 2313 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 CDO1Q16878 200 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 ARL13BQ3SXY8 428 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 TDRD12Q587J7 1177 aaKnown RBP17.85■□□□□ 0.45
USP39-208ENST00000455732 SH3PXD2AQ5TCZ1 1133 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 LRRC31Q6UY01 552 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 LPCAT2Q7L5N7 544 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 METTL3Q86U44 580 aaKnown RBP17.85■□□□□ 0.45
USP39-208ENST00000455732 TMEFF1Q8IYR6 380 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 TRIM11Q96F44 468 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 MYO19Q96H55 970 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 PPP1R9BQ96SB3 815 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 RTKNQ9BST9 563 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 ISCUQ9H1K1 167 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 FBRSQ9HAH7 460 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 CD93Q9NPY3 652 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 TMPRSS4Q9NRS4 437 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 PARVAQ9NVD7 372 aa17.85■□□□□ 0.45
USP39-208ENST00000455732 ADAMTS9Q9P2N4 1935 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 TMCO5BA8MYB1 307 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 E9PAM4 449 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 SLC30A4O14863 429 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 MAP3K13O43283 966 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 FTLP02792 175 aaPredicted RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 EPHX1P07099 455 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 SRPRAP08240 638 aaKnown RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 MYBL1P10243 752 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 CASP14P31944 242 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 ADRA1BP35368 520 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 PTGER3P43115 390 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 COPAP53621 1224 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 LIMK1P53667 647 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 SULT2A1Q06520 285 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 SCAPQ12770 1279 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 ZNF177Q13360 481 aaPredicted RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 AASDHQ4L235 1098 aaPredicted RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 RAB6CQ53S08 254 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 TCEAL6Q6IPX3 200 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 DCUN1D2Q6PH85 259 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 CYP2U1Q7Z449 544 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 VPS36Q86VN1 386 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 VSTM4Q8IW00 320 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 DRC7Q8IY82 874 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 C12orf50Q8NA57 414 aaPredicted RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 CPLX3Q8WVH0 158 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 TCEAL3Q969E4 200 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 ALG14Q96F25 216 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 MRGPRX3Q96LB0 322 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 CNPY3Q9BT09 278 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 RAB6CQ9H0N0 254 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 OSBPL2Q9H1P3 480 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 PPARGC1AQ9UBK2 798 aaKnown RBP17.84■□□□□ 0.45
USP39-208ENST00000455732 CYP8B1Q9UNU6 501 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 SNX10Q9Y5X0 201 aa17.84■□□□□ 0.45
USP39-208ENST00000455732 CCP110O43303 1012 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 CNTN5O94779 1100 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 HLA-EP13747 358 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 MZF1P28698 734 aaPredicted RBP17.83■□□□□ 0.44
USP39-208ENST00000455732 VASPP50552 380 aaPredicted RBP17.83■□□□□ 0.44
USP39-208ENST00000455732 ST8SIA6P61647 398 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 ECT2LQ008S8 904 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 RPL6Q02878 288 aaKnown RBP17.83■□□□□ 0.44
USP39-208ENST00000455732 ALFQ53S48 1182 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 MANEALQ5VSG8 457 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 SARM1Q6SZW1 724 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 SLC36A4Q6YBV0 504 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 SETD3Q86TU7 594 aaPredicted RBP17.83■□□□□ 0.44
USP39-208ENST00000455732 TMPRSS6Q8IU80 811 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 APCDD1Q8J025 514 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 OR2T3Q8NH03 318 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 FNIP1Q8TF40 1166 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 RETREG1Q9H6L5 497 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 PRDM16Q9HAZ2 1276 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 USP36Q9P275 1121 aaKnown RBP17.83■□□□□ 0.44
USP39-208ENST00000455732 ZNF212Q9UDV6 495 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 SUN2Q9UH99 717 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 ADAMTS1Q9UHI8 967 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 ERVW-1Q9UQF0 538 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 OR51B4Q9Y5P0 310 aa17.83■□□□□ 0.44
USP39-208ENST00000455732 ASCC3Q8N3C0 2202 aaKnown RBP17.83■□□□□ 0.44
USP39-208ENST00000455732 AP5Z1O43299 807 aa17.82■□□□□ 0.44
USP39-208ENST00000455732 ATMINO43313 823 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms