RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TRAF6Q9Y4K3 522 aa4□□□□□ -1.77
RBM39-220ENST00000455343 ASB3Q9Y575 518 aa4□□□□□ -1.77
RBM39-220ENST00000455343 MTCL1Q9Y4B5 1905 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 TENM4Q6N022 2769 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 CACNA1EQ15878 2313 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 A0A087WV48 116 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 LRRIQ4A6NIV6 560 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 SUV39H1O43463 412 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 FZD7O75084 574 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 GJB3O75712 270 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 FGF19O95750 216 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 OR4Q2P0C623 313 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 CD59P13987 128 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 ENGP17813 658 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 GABRR2P28476 465 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 PDIA3P30101 505 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 GJA4P35212 333 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 RDXP35241 583 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 HOXD12P35452 270 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 P2RY2P41231 377 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 PTGER3P43115 390 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 AKAP17AQ02040 695 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 DBPQ10586 325 aaPredicted RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 PLD1Q13393 1074 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 HNRNPDQ14103 355 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 KRT32Q14532 448 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 CRY1Q16526 586 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 GPR158Q5T848 1215 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 NAIF1Q69YI7 327 aaPredicted RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 TRIM68Q6AZZ1 485 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 NCAPH2Q6IBW4 605 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 NEK8Q86SG6 692 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 GLRX5Q86SX6 157 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 TMEM150AQ86TG1 271 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 SYT12Q8IV01 421 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 ZBTB8OSQ8IWT0 167 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 CMTM8Q8IZV2 173 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 ATAD1Q8NBU5 361 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 MCPH1Q8NEM0 835 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 APPL2Q8NEU8 664 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 MDGA1Q8NFP4 955 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 RPLP0P6Q8NHW5 317 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 PIGOQ8TEQ8 1089 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 PIGKQ92643 395 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 NEIL1Q96FI4 390 aaPredicted RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 LRRC37BQ96QE4 947 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 FNBP1Q96RU3 617 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 P2RY13Q9BPV8 354 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 SPATA9Q9BWV2 254 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 NUSAP1Q9BXS6 441 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 SLC26A6Q9BXS9 759 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 EBF3Q9H4W6 596 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 SLC39A2Q9NP94 309 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 TOPORSQ9NS56 1045 aaPredicted RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 THG1LQ9NWX6 298 aaKnown RBP3.99□□□□□ -1.77
RBM39-220ENST00000455343 PILRBQ9UKJ0 227 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 SRPK3Q9UPE1 567 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 CCL26Q9Y258 94 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 TNFSF13BQ9Y275 285 aa3.99□□□□□ -1.77
RBM39-220ENST00000455343 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ASXL3Q9C0F0 2248 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 NAV2Q8IVL1 2488 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 GREB1Q4ZG55 1949 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 A0A087WWV3 80 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 MTMR11A4FU01 709 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ANTXRLA6NF34 631 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 OR6C75A6NL08 312 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 K7EQS6 105 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 AQP7O14520 342 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 WNT9AO14904 365 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 CCNT1O60563 726 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 USO1O60763 962 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 CUTAO60888 179 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 CBFA2T3O75081 653 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 DEXIO95424 95 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 LARGE1O95461 756 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 HNRNPLP14866 589 aaKnown RBP eCLIP3.98□□□□□ -1.77
RBM39-220ENST00000455343 CPA1P15085 419 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ARSAP15289 507 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 PTPN1P18031 435 aaKnown RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 ATF6P18850 670 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 CYP11B2P19099 503 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 TYMPP19971 482 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 PROZP22891 400 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 CDC25CP30307 473 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 LRPAP1P30533 357 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 DPP6P42658 865 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 NAMPTP43490 491 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ALDH1A3P47895 512 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 DHPSP49366 369 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 DGKEP52429 567 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 EFNA5P52803 228 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 HMGA2P52926 109 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 YWHAHQ04917 246 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 PAK1Q13153 545 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 SLC14A1Q13336 389 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 TOP3AQ13472 1001 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 MYBPC2Q14324 1141 aa3.98□□□□□ -1.77
RBM39-220ENST00000455343 ZNF268Q14587 947 aaPredicted RBP3.98□□□□□ -1.77
RBM39-220ENST00000455343 PDGFRLQ15198 375 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms