RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 C9orf64Q5T6V5 341 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 ZNF658Q5TYW1 1059 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 TTC39BQ5VTQ0 682 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 FAM46CQ5VWP2 391 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 PMF1Q6P1K2 205 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 PRPF39Q86UA1 669 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 IQCHQ86VS3 1027 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 MMAAQ8IVH4 418 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 DHX40Q8IX18 779 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 ZC3H3Q8IXZ2 948 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 CACTIN-AS1Q8N1I8 211 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 CARNMT1Q8N4J0 409 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 MFSD2AQ8NA29 543 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 LSM14AQ8ND56 463 aaKnown RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SAP25Q8TEE9 199 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC35C1Q96A29 364 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 EEF2KMTQ96G04 330 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SERAC1Q96JX3 654 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 LMLNQ96KR4 655 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 FCRL2Q96LA5 508 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 CEP63Q96MT8 703 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLC6A18Q96N87 628 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 ORAI3Q9BRQ5 295 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 NRSN2Q9GZP1 204 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 NEUROG2Q9H2A3 272 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 RABGEF1Q9UJ41 708 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 ERVW-1Q9UQF0 538 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 DMTF1Q9Y222 760 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 SLCO1B1Q9Y6L6 691 aa8.3□□□□□ -1.08
NIF3L1-209ENST00000454952 FREM2Q5SZK8 3169 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 MYLKQ15746 1914 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 GOLGA6L7A0A1B0GV03 622 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 FAM149AA5PLN7 773 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 GOLGA6L4A6NEF3 574 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 F5H5T6 163 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 TLR4O00206 839 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 KCNK3O14649 394 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 CAPN9O14815 690 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 MED7O43513 233 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 EPHA8P29322 1005 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 PRCPP42785 496 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 RXRGP48443 463 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 PSMD8P48556 350 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 FMO5P49326 533 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 RGS7P49802 495 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 SGSHP51688 502 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 ADPRHP54922 357 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 RPS24P62847 133 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 IL9RQ01113 521 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 GCNT1Q02742 428 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 C19orf57Q0VDD7 668 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 LRMPQ12912 555 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 HS1BP3Q53T59 392 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 KCNT1Q5JUK3 1230 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 NADSYN1Q6IA69 706 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 NAPEPLDQ6IQ20 393 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 LAYNQ6UX15 382 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 SMYD4Q8IYR2 804 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 PPM1KQ8N3J5 372 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 UBR7Q8N806 425 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 ATP6V0D2Q8N8Y2 350 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 OR14C36Q8NHC7 312 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 WFDC5Q8TCV5 224 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 DQX1Q8TE96 717 aaKnown RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 STK32AQ8WU08 396 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 TFAP2BQ92481 460 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 FAM149B1Q96BN6 582 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 MYO19Q96H55 970 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 DHTKD1Q96HY7 919 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 BTN2A3PQ96KV6 586 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 MRGPRX3Q96LB0 322 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 FAM81BQ96LP2 452 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 PRICKLE1Q96MT3 831 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 SPAG5Q96R06 1193 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 MED15Q96RN5 788 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 AK5Q9Y6K8 562 aa8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 ARID1BQ8NFD5 2236 aaPredicted RBP8.29□□□□□ -1.08
NIF3L1-209ENST00000454952 IGSF10Q6WRI0 2623 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3DA0A087WVF3 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3IA0A087WXS9 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3EA0A087X179 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3KA0A087X1G2 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 A0A1W2PR77 199 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3FA6NER0 549 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 CAPN8A6NHC0 703 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TTC34A8MYJ7 566 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3LB9A6J9 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 C1QTNF3-AMACRE9PGA6 284 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 PLK4O00444 970 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 ALOX15BO15296 676 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 LATO43561 262 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 RNGTTO60942 597 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 IL1BP01584 269 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 TBC1D3HP0C7X1 549 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 CKMT2P17540 419 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 BRD2P25440 801 aaKnown RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 MZF1P28698 734 aaPredicted RBP8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 ACTN2P35609 894 aa8.28□□□□□ -1.08
NIF3L1-209ENST00000454952 RPL34P49207 117 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms