RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 BEND5Q7L4P6 421 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 PRPF39Q86UA1 669 aaKnown RBP24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 APCDD1Q8J025 514 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 AADATQ8N5Z0 425 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 EID2Q8N6I1 236 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 ATP6V0D2Q8N8Y2 350 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 EHBP1Q8NDI1 1231 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 SPATA20Q8TB22 786 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 NXPE2Q96DL1 559 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 DCBLD2Q96PD2 775 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 MED15Q96RN5 788 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 ITIH6Q6UXX5 1313 aa24.52■■□□□ 1.52
LYSMD2-202ENST00000454181 TLR4O00206 839 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 PLK4O00444 970 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 ADPRHP54922 357 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 SULT2A1Q06520 285 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 SYPL2Q5VXT5 272 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 KLHL10Q6JEL2 608 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 DSG4Q86SJ6 1040 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 ARHGEF19Q8IW93 802 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 OXR1Q8N573 874 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 LMO3Q8TAP4 145 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 SAP25Q8TEE9 199 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 PPP1R9BQ96SB3 815 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 POPDC2Q9HBU9 364 aa24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 XPO7Q9UIA9 1087 aaKnown RBP24.51■■□□□ 1.51
LYSMD2-202ENST00000454181 A0A087WV48 116 aa24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 TRUB2O95900 331 aaKnown RBP24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 RPL34P49207 117 aaKnown RBP24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 STK19P49842 368 aaPredicted RBP24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 OXCT1P55809 520 aa24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 YWHAZP63104 245 aaKnown RBP24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 STK32AQ8WU08 396 aa24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 PTPRN2Q92932 1015 aa24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.5■■□□□ 1.51
LYSMD2-202ENST00000454181 A0A1W2PR77 199 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 CBX4O00257 560 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 MAGEC1O60732 1142 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 PDGFRAP16234 1089 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 MZF1P28698 734 aaPredicted RBP24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 ABCG1P45844 678 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 DNAJC3Q13217 504 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 RABGAP1LQ5R372 815 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 DENND1BQ6P3S1 775 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 RNF34Q969K3 372 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 TIGD1Q96MW7 591 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 SPAG5Q96R06 1193 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 THAP9Q9H5L6 903 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 FAM204AQ9H8W3 233 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 AK5Q9Y6K8 562 aa24.49■■□□□ 1.51
LYSMD2-202ENST00000454181 BICDL2A1A5D9 508 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 KCNU1A8MYU2 1149 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 WNT9AO14904 365 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 LETM1O95202 739 aaPredicted RBP24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 GNA14O95837 355 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 SLC2A3P11169 496 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 EPHA8P29322 1005 aaPredicted RBP24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 NXPH1P58417 271 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 KCNH2Q12809 1159 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 SHBQ15464 509 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 ACCSLQ4AC99 568 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 TTC39BQ5VTQ0 682 aaPredicted RBP24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 FAM46CQ5VWP2 391 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 NAPEPLDQ6IQ20 393 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 IGSF10Q6WRI0 2623 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 CCAR2Q8N163 923 aaKnown RBP24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 MFSD2AQ8NA29 543 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 OR8D1Q8WZ84 308 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 SLC4A5Q9BY07 1137 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 ERVMER34-1Q9H9K5 563 aa24.48■■□□□ 1.51
LYSMD2-202ENST00000454181 KNTC1P50748 2209 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 E5RJQ4 531 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 NUDT1P36639 197 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 NUMBP49757 651 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 CDK17Q00537 523 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 LRRC69Q6ZNQ3 347 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 NELFBQ8WX92 580 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 KREMEN1Q96MU8 473 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 INTS2Q9H0H0 1204 aaKnown RBP24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 KDM4CQ9H3R0 1056 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 UBE2TQ9NPD8 197 aaPredicted RBP24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 SLC25A13Q9UJS0 675 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 MAN1B1Q9UKM7 699 aa24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.47■■□□□ 1.51
LYSMD2-202ENST00000454181 A0A1B0GVM2 712 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 TCAF2A6NFQ2 919 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 SLC7A4O43246 635 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 THAP12O43422 761 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 AFPP02771 609 aaKnown RBP24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 CD44P16070 742 aaKnown RBP24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 ZNF18P17022 549 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 RXRGP48443 463 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 ACADVLP49748 655 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 SEMG2Q02383 582 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 BNIP3Q12983 259 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 TARDBPQ13148 414 aaKnown RBP eCLIP24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 STAT4Q14765 748 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 MEA1Q16626 185 aa24.46■■□□□ 1.51
LYSMD2-202ENST00000454181 TTI2Q6NXR4 508 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms