RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 DDX50Q9BQ39 737 aaKnown RBP9.13□□□□□ -0.95
DEPDC1B-202ENST00000453022 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
DEPDC1B-202ENST00000453022 CYTH4Q9UIA0 394 aa9.13□□□□□ -0.95
DEPDC1B-202ENST00000453022 DOCK4Q8N1I0 1966 aa9.13□□□□□ -0.95
DEPDC1B-202ENST00000453022 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
DEPDC1B-202ENST00000453022 LATO43561 262 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 RFPL3O75679 317 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 LDOC1O95751 146 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 GOT1P17174 413 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 TACR2P21452 398 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 EPHA8P29322 1005 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 NXPH1P58417 271 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 GCNT1Q02742 428 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 EIF4EBP2Q13542 120 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CCDC40Q4G0X9 1142 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SND1Q7KZF4 910 aaKnown RBP eCLIP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 BEND5Q7L4P6 421 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 KANSL1Q7Z3B3 1105 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 TMPRSS12Q86WS5 348 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CHSY1Q86X52 802 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CIR1Q86X95 450 aaPredicted RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 TSC1Q92574 1164 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SMARCE1Q969G3 411 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 FAM131CQ96AQ9 280 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CCDC34Q96HJ3 373 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CEP63Q96MT8 703 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 PRMT1Q99873 361 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ST7Q9NRC1 585 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 AASDHPPTQ9NRN7 309 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CNTN6Q9UQ52 1028 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 PCDHGA1Q9Y5H4 931 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ATP6V1DQ9Y5K8 247 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 PTPRQQ9UMZ3 2332 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 E5RJQ4 531 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 E9PAM4 449 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 PSMA7O14818 248 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SMC2O95347 1197 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ADH1BP00325 375 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ITGAVP06756 1048 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 PDGFRAP16234 1089 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ABCB4P21439 1286 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 C5AR1P21730 350 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 BMP6P22004 513 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SFSWAPQ12872 951 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 BNIP3Q12983 259 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ELAVL3Q14576 367 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SFMBT2Q5VUG0 894 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ISM2Q6H9L7 571 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CXorf57Q6NSI4 855 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 FBXL19Q6PCT2 694 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SPATS2Q86XZ4 545 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CCAR2Q8N163 923 aaKnown RBP9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 EID2Q8N6I1 236 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 OR14C36Q8NHC7 312 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 FRS2Q8WU20 508 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 NXPE2Q96DL1 559 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SERAC1Q96JX3 654 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 BTN2A3PQ96KV6 586 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ACP6Q9NPH0 428 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 GDF3Q9NR23 364 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ARHGAP20Q9P2F6 1191 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 TJP2Q9UDY2 1190 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 MAN1B1Q9UKM7 699 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 SARDHQ9UL12 918 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
DEPDC1B-202ENST00000453022 ASH1LQ9NR48 2969 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 TLR4O00206 839 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 P4HA2O15460 535 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 YKT6O15498 198 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 SART1O43290 800 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 TLX3O43711 291 aaPredicted RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 RTN2O75298 545 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 MOCS3O95396 460 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 TRUB2O95900 331 aaKnown RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 IL1BP01584 269 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 APOEP02649 317 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 ITPKBP27987 946 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 HNF1BP35680 557 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 IRAK1P51617 712 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 CENPCQ03188 943 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 TAF5Q15542 800 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 RNF219Q5W0B1 726 aaPredicted RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 NAPEPLDQ6IQ20 393 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 CCDC117Q8IWD4 279 aaPredicted RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 TRIM59Q8IWR1 403 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 OR52K2Q8NGK3 314 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 SKA1Q96BD8 255 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 ALG14Q96F25 216 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 DHTKD1Q96HY7 919 aaPredicted RBP9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 ERVMER34-1Q9H9K5 563 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 POPDC2Q9HBU9 364 aa9.11□□□□□ -0.95
DEPDC1B-202ENST00000453022 TBC1D3DA0A087WVF3 549 aa9.1□□□□□ -0.95
DEPDC1B-202ENST00000453022 TBC1D3IA0A087WXS9 549 aa9.1□□□□□ -0.95
DEPDC1B-202ENST00000453022 TBC1D3EA0A087X179 549 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms