RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GAREM2Q75VX8 874 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ERN2Q76MJ5 926 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM129CQ86XR2 697 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MIB1Q86YT6 1006 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CNTN4Q8IWV2 1026 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC15A4Q8N697 577 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CDYL2Q8N8U2 506 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 GPR156Q8NFN8 814 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TNIP2Q8NFZ5 429 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CCHCR1Q8TD31 782 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 DUSP19Q8WTR2 217 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 WDR60Q8WVS4 1066 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC13A3Q8WWT9 602 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ASB15Q8WXK1 588 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SPSB4Q96A44 273 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 RAB7BQ96AH8 199 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MIEF2Q96C03 454 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 GRAMD1AQ96CP6 724 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 GDAP1L1Q96MZ0 367 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TUBB2BQ9BVA1 445 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PHF7Q9BWX1 381 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CARD11Q9BXL7 1154 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TEX13AQ9BXU3 409 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRIM7Q9C029 511 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TTYH1Q9H313 450 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 NELFAQ9H3P2 528 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC32A1Q9H598 525 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ZNF552Q9H707 407 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 VCPKMTQ9H867 229 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TTC12Q9H892 705 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MAGEE1Q9HCI5 957 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TNFRSF12AQ9NP84 129 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC6A20Q9NP91 592 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CD320Q9NPF0 282 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 DDX4Q9NQI0 724 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 MBNL1Q9NR56 388 aaKnown RBP4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 GLRX2Q9NS18 164 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMOD2Q9NZR1 351 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLCO3A1Q9UIG8 710 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ACSL6Q9UKU0 697 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 ATP11BQ9Y2G3 1177 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 TELO2Q9Y4R8 837 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCDHB6Q9Y5E3 794 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 PCDHGA5Q9Y5G8 931 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 CLDN16Q9Y5I7 305 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 COL15A1P39059 1388 aa4.61□□□□□ -1.67
HMGB3P21-201ENST00000452483 EME2A4GXA9 379 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A18PA6NE21 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A16PA6NEW6 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TCAF2A6NFQ2 919 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A27PA6NNH2 459 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A9PA6NNJ1 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A5PA8MXJ8 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 H0Y858 1186 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 MYO1CO00159 1063 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CD3EAPO15446 510 aaKnown RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SEPT4O43236 478 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 GMFGO60234 142 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SEC14L2O76054 403 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 RECQL5O94762 991 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 PRLP01236 227 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TUBBP07437 444 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 WEE2P0C1S8 567 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A15PP0C7V4 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A14PP0C7W9 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CSF2RAP15509 400 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ACVR2AP27037 513 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ICAM3P32942 547 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 PBX3P40426 434 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ARL1P40616 181 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC15A1P46059 708 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ARCN1P48444 511 aaKnown RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 PIK3CGP48736 1102 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 PITPNBP48739 271 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 GPR15P49685 360 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 STAT2P52630 851 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CDH15P55291 814 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 HAND2P61296 217 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRA2BP62995 288 aaKnown RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TUBB4BP68371 445 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CYP4F8P98187 520 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ELP6Q0PNE2 266 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TBL3Q12788 808 aaKnown RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TMEM115Q12893 351 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 GPS1Q13098 491 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TRA2AQ13595 282 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CLCA4Q14CN2 919 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 INSCQ1MX18 579 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 CRY2Q49AN0 593 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 AADACL4Q5VUY2 407 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 PM20D1Q6GTS8 502 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 DGAT2L7PQ6IED9 249 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 KANSL1Q7Z3B3 1105 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 ADCK2Q7Z695 626 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 TAF8Q7Z7C8 310 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 FAM90A1Q86YD7 464 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 RHPN2Q8IUC4 686 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 GLB1L2Q8IW92 636 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 SFRP1Q8N474 314 aa4.6□□□□□ -1.67
HMGB3P21-201ENST00000452483 DNAJC5GQ8N7S2 189 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms