RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 ZBTB45Q96K62 511 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 CCDC17Q96LX7 622 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 FCRL4Q96PJ5 515 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 FAM118BQ9BPY3 351 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 COA1Q9GZY4 146 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 FAM83DQ9H4H8 585 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 SNX15Q9NRS6 342 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 KLHL13Q9P2N7 655 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 LPAR3Q9UBY5 353 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 TCEAL9Q9UHQ7 104 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 MID2Q9UJV3 735 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 OGDHLQ9ULD0 1010 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 CAPN11Q9UMQ6 739 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 ZNF521Q96K83 1311 aa4.93□□□□□ -1.62
GTF3C3-207ENST00000451088 MED23Q9ULK4 1368 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 SSC5DA1L4H1 1573 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 CHD8Q9HCK8 2581 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 ANKRD18BA2A2Z9 1011 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 AQP7P3A6NL99 342 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 TMEM232C9JQI7 657 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 TMPRSS11DO60235 418 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 GCATO75600 419 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 PIAS2O75928 621 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 PARP1P09874 1014 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 CETPP11597 493 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 HGFP14210 728 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 ZKSCAN1P17029 563 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 ATF7P17544 494 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 IL1R2P27930 398 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 GATMP50440 423 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 PGDP52209 483 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 FAM193AP78312 1265 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 IFIT5Q13325 482 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 GCKRQ14397 625 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 GRM3Q14832 879 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 LARS2Q15031 903 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 SHHQ15465 462 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 TMEM31Q5JXX7 168 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 CCDC149Q6ZUS6 474 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 DNAAF4Q8WXU2 420 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 PPM1EQ8WY54 764 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 TSR2Q969E8 191 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 ZNF668Q96K58 619 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 LBHD1Q9BQE6 289 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 EFHD1Q9BUP0 239 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 SPRTNQ9H040 489 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 VPS16Q9H269 839 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 C11orf49Q9H6J7 331 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 ZNF287Q9HBT7 754 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 ZCCHC17Q9NP64 241 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 MGAT4CQ9UBM8 478 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 RIMKLBQ9ULI2 386 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 PKD1L2Q7Z442 2459 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 BRWD1Q9NSI6 2320 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 COL2A1P02458 1487 aaPredicted RBP4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 LRRC37AA6NMS7 1700 aa4.92□□□□□ -1.62
GTF3C3-207ENST00000451088 A8MVJ9 347 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 VSTM5A8MXK1 200 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 RAB27BO00194 218 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 INMTO95050 263 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 MAP4K4O95819 1239 aaPredicted RBP4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 IGKV5-2P06315 115 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 CREB1P16220 341 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 ITGB6P18564 788 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 RPL17P18621 184 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 MMP13P45452 471 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 CCT4P50991 539 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 COPB1P53618 953 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 ITGA8P53708 1063 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 GALEQ14376 348 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 DLGAP5Q15398 846 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 KIAA0753Q2KHM9 967 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 CCDC57Q2TAC2 916 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 Q4G0T1 1027 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 GLIPR1L2Q4G1C9 344 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 KRT73Q86Y46 540 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 CNGA4Q8IV77 575 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 YAF2Q8IY57 180 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 TSPYL6Q8N831 410 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 PIGOQ8TEQ8 1089 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 COQ8BQ96D53 544 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 KAZALD1Q96I82 304 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 ELOVL5Q9NYP7 299 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 VPS51Q9UID3 782 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 FANCIQ9NVI1 1328 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 BAHCC1Q9P281 2608 aa4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 PRRC2BQ5JSZ5 2229 aaKnown RBP4.91□□□□□ -1.62
GTF3C3-207ENST00000451088 GOLGA6CA6NDK9 693 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 GOLGA6BA6NDN3 693 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 DSCR3O14972 297 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 MGEA5O60502 916 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 GOLGA6DP0CG33 693 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 CD19P15391 556 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 TPH1P17752 444 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 PEX2P28328 305 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 MCM5P33992 734 aa4.9□□□□□ -1.63
GTF3C3-207ENST00000451088 NR4A2P43354 598 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms